RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 PDZD11Q5EBL8 140 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 NCMAPQ5T1S8 102 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 AVPI1Q5T686 147 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 STEAP1BQ6NZ63 245 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 LEG1Q6P5S2 330 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF600Q6ZNG1 722 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 ABHD13Q7L211 337 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 SLC36A1Q7Z2H8 476 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 KRT77Q7Z794 578 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 ARMC10Q8N2F6 343 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 RAB42Q8N4Z0 105 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 CHST4Q8NCG5 386 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 BHLHE23Q8NDY6 225 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 OR56A1Q8NGH5 318 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 OR6N2Q8NGY6 317 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 OR14C36Q8NHC7 312 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 SDF2Q99470 211 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 APMAPQ9HDC9 416 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 RPS10P5Q9NQ39 176 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 APOBEC3BQ9UH17 382 aaKnown RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 TMEM235A6NFC5 223 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 KLF4O43474 513 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 PAPLNO95428 1278 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 SNRNP70P08621 437 aaKnown RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF888P0CJ79 500 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 RNF224P0DH78 156 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 NME2P22392 152 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 FAUP35544 74 aaKnown RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 LSSP48449 732 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 PSMD4P55036 377 aaKnown RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 FABP9Q0Z7S8 132 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 SGCGQ13326 291 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 NR0B2Q15466 257 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 HACD4Q5VWC8 232 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 FCRL6Q6DN72 434 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 ADAM5Q6NVV9 412 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 LCTLQ6UWM7 567 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 PRSS41Q7RTY9 318 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 ASPGQ86U10 573 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 BIVMQ86UB2 503 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 DND1Q8IYX4 353 aaKnown RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 GVQW1Q8N7I0 195 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 INO80EQ8NBZ0 244 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 ACBD4Q8NC06 268 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 OR1M1Q8NGA1 313 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 OR5T3Q8NGG3 340 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 OR6K3Q8NGY3 331 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 GLYATL2Q8WU03 294 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 DCUN1D4Q92564 292 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 MOAP1Q96BY2 351 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 MS4A6EQ96DS6 147 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 SMIM3Q9BZL3 60 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 SLC19A3Q9BZV2 496 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 OR52A5Q9H2C5 316 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 MTHFD2LQ9H903 347 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 MED17Q9NVC6 651 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 GSKIPQ9P0R6 139 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 NDRG3Q9UGV2 375 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 SLC22A13Q9Y226 551 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 PLXNA3P51805 1871 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 DENND4AQ7Z401 1863 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 A0A1B0GW55 424 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 A0A1B0GWA3 101 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 MEX3AA1L020 520 aaKnown RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 CARNS1A5YM72 827 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 GSTZ1O43708 216 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 LILRB5O75023 590 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 ITGA10O75578 1167 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 IFNGP01579 166 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 DUX4L2P0CJ85 424 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 DUX4L3P0CJ86 424 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 DUX4L4P0CJ87 422 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 DUX4L5P0CJ88 424 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 DUX4L6P0CJ89 424 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 DUX4L7P0CJ90 424 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 CPN1P15169 458 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 CD80P33681 288 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 PRSS3P35030 304 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 PRKXP51817 358 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 BDH1Q02338 343 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 AIMP2Q13155 320 aaKnown RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 PEA15Q15121 130 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 CDNFQ49AH0 187 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 LY6G6FQ5SQ64 297 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 JMJD6Q6NYC1 403 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 TTLL10Q6ZVT0 673 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 DPY19L4Q7Z388 723 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 RTN4RL2Q86UN3 420 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 OR5AK2Q8NH90 309 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 HAVCR1Q96D42 359 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 LRRC3BQ96PB8 259 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 CLCC1Q96S66 551 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 INSM2Q96T92 566 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 MAP3K3Q99759 626 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 CMKLR1Q99788 373 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 NAA11Q9BSU3 229 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-208ENST00000504387 TMEM27Q9HBJ8 222 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 SAGE1Q9NXZ1 904 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 CALML5Q9NZT1 146 aa6.95□□□□□ -1.3
NEDD9-208ENST00000504387 DUX4Q9UBX2 424 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms