RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 MUC20Q8N307 709 aaPredicted RBP10.41□□□□□ -0.74
LSM6-204ENST00000504181 OR7A2PQ8NGA2 310 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 OR1J1Q8NGS3 322 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 SFXN5Q8TD22 340 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 IPCEF1Q8WWN9 437 aaPredicted RBP10.41□□□□□ -0.74
LSM6-204ENST00000504181 GATAD2BQ8WXI9 593 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 LRTOMTQ8WZ04 291 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 SLC25A36Q96CQ1 311 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 R3HDM4Q96D70 268 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 FOXB1Q99853 325 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 BCL2L14Q9BZR8 327 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 DPH5Q9H2P9 285 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.41□□□□□ -0.74
LSM6-204ENST00000504181 B3GAT1Q9P2W7 334 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 GPR45Q9Y5Y3 372 aa10.41□□□□□ -0.74
LSM6-204ENST00000504181 A0A0U1RQK1 487 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 CENPVL3A0A0U1RRI6 287 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 A8MVM7 634 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 POC1B-GALNT4F8VUJ3 575 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 LAMP1P11279 417 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 CD33P20138 364 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 GABRA5P31644 462 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 MPV17P39210 176 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 MDH2P40926 338 aaKnown RBP10.4□□□□□ -0.74
LSM6-204ENST00000504181 MAGEA12P43365 314 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 KRTAP10-11P60412 298 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 MRPS25P82663 173 aaKnown RBP10.4□□□□□ -0.74
LSM6-204ENST00000504181 SPATA46Q5T0L3 261 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 ZBTB37Q5TC79 503 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 KLBQ86Z14 1044 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 SKA3Q8IX90 412 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 CLEC4FQ8N1N0 589 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 GALNT4Q8N4A0 578 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 FITM2Q8N6M3 262 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 KLHDC1Q8N7A1 406 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 ZNF283Q8N7M2 679 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 PSMA8Q8TAA3 256 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 OR5P2Q8WZ92 322 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 MOAP1Q96BY2 351 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 MTERF3Q96E29 417 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 SIGLEC11Q96RL6 698 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 DPAGT1Q9H3H5 408 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 FBLN5Q9UBX5 448 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 CCL27Q9Y4X3 112 aa10.4□□□□□ -0.74
LSM6-204ENST00000504181 PRAMEF27A3QJZ7 478 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 DUXAA6NLW8 204 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 CFLARO15519 480 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 AKAP8O43823 692 aaKnown RBP10.39□□□□□ -0.75
LSM6-204ENST00000504181 TFPTP0C1Z6 253 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 TAC1P20366 129 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 IMPDH1P20839 514 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 GTF2E2P29084 291 aaKnown RBP10.39□□□□□ -0.75
LSM6-204ENST00000504181 TGFBR2P37173 567 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 RPL38P63173 70 aaKnown RBP10.39□□□□□ -0.75
LSM6-204ENST00000504181 TNFAIP6P98066 277 aaPredicted RBP10.39□□□□□ -0.75
LSM6-204ENST00000504181 LIPMQ5VYY2 423 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 AP1ARQ63HQ0 302 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 FRRS1Q6ZNA5 592 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 C1orf122Q6ZSJ8 110 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 C20orf196Q8IYI0 205 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 MUC7Q8TAX7 377 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 SLC35G5Q96KT7 338 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 FCRL1Q96LA6 429 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 OXGR1Q96P68 337 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 ARHGDIGQ99819 225 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 EMC6Q9BV81 110 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 TRIM15Q9C019 465 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 MSL2Q9HCI7 577 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 B3GAT2Q9NPZ5 323 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 EXD2Q9NVH0 621 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 C1orf109Q9NX04 203 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 KIF17Q9P2E2 1029 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 USH1CQ9Y6N9 552 aa10.39□□□□□ -0.75
LSM6-204ENST00000504181 CFAP73A6NFT4 308 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 ANKRD61A6NGH8 418 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 FAAHO00519 579 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 CRCPO75575 148 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 MFN2O95140 757 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 ZNF205O95201 554 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 CD55P08174 381 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 ADH4P08319 380 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 OR12D1P0DN82 309 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 PRPH2P23942 346 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 HPCAL1P37235 193 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 MAGEA4P43358 317 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 EFNB2P52799 333 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 FUT5Q11128 374 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 EPS8Q12929 822 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 CALCOCO2Q13137 446 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 TBC1D28Q2M2D7 210 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 COX20Q5RI15 118 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 THEM4Q5T1C6 240 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 C6orf120Q7Z4R8 191 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 CADM2Q8N3J6 435 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 SCCPDHQ8NBX0 429 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 PNPT1Q8TCS8 783 aaKnown RBP10.38□□□□□ -0.75
LSM6-204ENST00000504181 OIT3Q8WWZ8 545 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 METTL2AQ96IZ6 378 aaKnown RBP10.38□□□□□ -0.75
LSM6-204ENST00000504181 PLEKHA8Q96JA3 519 aa10.38□□□□□ -0.75
LSM6-204ENST00000504181 CDADC1Q9BWV3 514 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms