RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 SOX14O95416 240 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 PPP1R3DO95685 299 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 IGHV3-9P01782 118 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 IGHMP01871 453 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 CD14P08571 375 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 ANPEPP15144 967 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 ZNF26P17031 533 aaPredicted RBP8.86□□□□□ -0.99
NUP54-203ENST00000504173 EDNRAP25101 427 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 SLC6A6P31641 620 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 ASCL1P50553 236 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 FXYD6P3P58550 94 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 RPL27P61353 136 aaKnown RBP8.86□□□□□ -0.99
NUP54-203ENST00000504173 ERVK-25P63136 954 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 COX10Q12887 443 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 CDSNQ15517 529 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 ACKR1Q16570 336 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 RFX4Q33E94 735 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 CARD17Q5XLA6 110 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 ANKRD34AQ69YU3 496 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 RPL13AP3Q6NVV1 102 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 KLHL17Q6TDP4 642 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 CD300LDQ6UXZ3 194 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 THSD4Q6ZMP0 1018 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 KIF18BQ86Y91 864 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 UBE2J2Q8N2K1 259 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 ASB10Q8WXI3 467 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 DNAJC9Q8WXX5 260 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 LRRC46Q96FV0 321 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 ADAD1Q96M93 576 aaKnown RBP8.86□□□□□ -0.99
NUP54-203ENST00000504173 OR2M2Q96R28 347 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 GPX7Q96SL4 187 aaPredicted RBP8.86□□□□□ -0.99
NUP54-203ENST00000504173 EMC6Q9BV81 110 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 ENKD1Q9H0I2 346 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 SLCO5A1Q9H2Y9 848 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 TXNIPQ9H3M7 391 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 EGLN3Q9H6Z9 239 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 TBC1D23Q9NUY8 699 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 JKAMPQ9P055 326 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 STX18Q9P2W9 335 aaKnown RBP8.86□□□□□ -0.99
NUP54-203ENST00000504173 UPB1Q9UBR1 384 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 PRSS50Q9UI38 385 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 ZNF346Q9UL40 294 aaKnown RBP8.86□□□□□ -0.99
NUP54-203ENST00000504173 POFUT2Q9Y2G5 429 aa8.86□□□□□ -0.99
NUP54-203ENST00000504173 OR6C65A6NJZ3 312 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 A8MXE2 369 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 H3BN98 237 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 PDLIM1O00151 329 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 ZNF432O94892 652 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 IGHG1P01857 330 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 IGFBP1P08833 259 aaPredicted RBP8.85□□□□□ -0.99
NUP54-203ENST00000504173 DAPP51397 102 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 RPS6KA3P51812 740 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 CLRN1P58418 232 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 CAMK2DQ13557 499 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 SLC36A3Q495N2 470 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 CLEC12AQ5QGZ9 265 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 TSPO2Q5TGU0 170 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 FBXW9Q5XUX1 488 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 FAM205BPQ63HN1 556 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 FAHD1Q6P587 224 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 ZNF474Q6S9Z5 364 aaPredicted RBP8.85□□□□□ -0.99
NUP54-203ENST00000504173 NHLRC1Q6VVB1 395 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 DPY19L2P2Q6ZN68 376 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 BEND4Q6ZU67 534 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 TMEM123Q8N131 208 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 GPR137CQ8N3F9 429 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 CLDN22Q8N7P3 220 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 POMGNT2Q8NAT1 580 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 OR6N1Q8NGY5 312 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 OR6X1Q8NH79 312 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 TEX47Q8TBZ9 253 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 ZNF566Q969W8 418 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 EME1Q96AY2 570 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 SLC25A44Q96H78 314 aaPredicted RBP8.85□□□□□ -0.99
NUP54-203ENST00000504173 Q96M85 177 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 ZNF570Q96NI8 536 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 ALKBH3Q96Q83 286 aaPredicted RBP8.85□□□□□ -0.99
NUP54-203ENST00000504173 TSPAN32Q96QS1 320 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 CIB1Q99828 191 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 RBM4BQ9BQ04 359 aaKnown RBP8.85□□□□□ -0.99
NUP54-203ENST00000504173 C9orf16Q9BUW7 83 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 IFT27Q9BW83 186 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 RBM4Q9BWF3 364 aaKnown RBP8.85□□□□□ -0.99
NUP54-203ENST00000504173 RBM24Q9BX46 236 aaKnown RBP8.85□□□□□ -0.99
NUP54-203ENST00000504173 TSSK6Q9BXA6 273 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 OSBPL10Q9BXB5 764 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 PLA2G12AQ9BZM1 189 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 DCLRE1BQ9H816 532 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 SMURF2Q9HAU4 748 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 NRIP3Q9NQ35 241 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 PAPOLBQ9NRJ5 636 aaKnown RBP8.85□□□□□ -0.99
NUP54-203ENST00000504173 KRT84Q9NSB2 600 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 IL20Q9NYY1 176 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 GRHPRQ9UBQ7 328 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 ADAM18Q9Y3Q7 739 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 IER3IP1Q9Y5U9 82 aa8.85□□□□□ -0.99
NUP54-203ENST00000504173 TEX13CA0A0J9YWL9 993 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 A6NIZ1 184 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 ZNF587BE7ETH6 402 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 M0R3G1 203 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms