RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 GABARAPL1Q9H0R8 117 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 GHRLQ9UBU3 117 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 OR52A1Q9UKL2 312 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 RAB22AQ9UL26 194 aa15.23■□□□□ 0.03
PCDHA1-203ENST00000504120 SSX4O60224 188 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 MED6O75586 246 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 STK17BO94768 372 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 ATP1B1P05026 303 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 SRMP19623 302 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 ZNF93P35789 620 aaPredicted RBP15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 BEX5Q5H9J7 111 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 ADGRE4PQ86SQ3 457 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 FAM3DQ96BQ1 224 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 CNTNAP3Q9BZ76 1288 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 PLCXD1Q9NUJ7 323 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 HMGN4O00479 90 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 ZNF749O43361 778 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 TNFSF12O43508 249 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 CD1CP29017 333 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 HTD2P86397 168 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 OPCMLQ14982 345 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 EXT1Q16394 746 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 AADACL3Q5VUY0 350 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 YOD1Q5VVQ6 348 aaPredicted RBP15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 PTCRAQ6ISU1 281 aaPredicted RBP15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 H1FNTQ75WM6 255 aaPredicted RBP15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 SLC25A43Q8WUT9 341 aaPredicted RBP15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 RASD2Q96D21 266 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 TSSK2Q96PF2 358 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 C11orf54Q9H0W9 315 aaPredicted RBP15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 ZNF814B7Z6K7 855 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 FKBP2P26885 142 aaKnown RBP15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 ACSM1Q08AH1 577 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 PARM1Q6UWI2 310 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 OLIG3Q7RTU3 272 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 NGBQ9NPG2 151 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 MED16Q9Y2X0 877 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 KCNK2O95069 426 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 EN2P19622 333 aaPredicted RBP15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 IRS1P35568 1242 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 GRB2P62993 217 aaKnown RBP15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 IHHQ14623 411 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 SYT14P1Q58G82 188 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 OR11L1Q8NGX0 322 aa15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 DUS3LQ96G46 650 aaKnown RBP15.22■□□□□ 0.03
PCDHA1-203ENST00000504120 GMDSO60547 372 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 B3GALT4O96024 378 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 LILRB4Q8NHJ6 448 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 ELF4Q99607 663 aaPredicted RBP15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 SGPP1Q9BX95 441 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 GAREM1Q9H706 876 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 TBC1D29Q9UFV1 150 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 PADI1Q9ULC6 663 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 COPS3Q9UNS2 423 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 GPR55Q9Y2T6 319 aaPredicted RBP15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 CLEC2LP0C7M8 214 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 TRMT12Q53H54 448 aaKnown RBP15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 SVBPQ8N300 66 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 PFN4Q8NHR9 129 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 HSD17B8Q92506 261 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 HAS2Q92819 552 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 ABHD16AO95870 558 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 SLC22A25Q6T423 547 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 RBM45Q8IUH3 476 aaKnown RBP15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 NKAIN4Q8IVV8 208 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 BBS1Q8NFJ9 593 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 FGGYQ96C11 551 aa15.21■□□□□ 0.03
PCDHA1-203ENST00000504120 A0A1W2PR48 441 aa15.21■□□□□ 0.02
PCDHA1-203ENST00000504120 E9PI62 339 aa15.21■□□□□ 0.02
PCDHA1-203ENST00000504120 SELENOFO60613 162 aa15.21■□□□□ 0.02
PCDHA1-203ENST00000504120 RPL35P42766 123 aaKnown RBP15.21■□□□□ 0.02
PCDHA1-203ENST00000504120 TEKQ02763 1124 aa15.21■□□□□ 0.02
PCDHA1-203ENST00000504120 CAMK2BQ13554 666 aa15.21■□□□□ 0.02
PCDHA1-203ENST00000504120 FAM109AQ8N4B1 249 aa15.21■□□□□ 0.02
PCDHA1-203ENST00000504120 GJC3Q8NFK1 279 aa15.21■□□□□ 0.02
PCDHA1-203ENST00000504120 ZIC5Q96T25 663 aa15.21■□□□□ 0.02
PCDHA1-203ENST00000504120 SDF2Q99470 211 aa15.21■□□□□ 0.02
PCDHA1-203ENST00000504120 TEAD3Q99594 435 aa15.21■□□□□ 0.02
PCDHA1-203ENST00000504120 FAM212BQ9NTI7 297 aaPredicted RBP15.21■□□□□ 0.02
PCDHA1-203ENST00000504120 A0A0U1RQK1 487 aa15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 ZNF587BE7ETH6 402 aa15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 RFXAPO00287 272 aa15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 FBXO24O75426 580 aa15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 RPL27P61353 136 aaKnown RBP15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 SLC35A2P78381 396 aa15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 GLYATL3Q5SZD4 288 aa15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 S100A7AQ86SG5 101 aa15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 FAM26EQ8N5C1 309 aa15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 Q96M85 177 aa15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 ARPC5LQ9BPX5 153 aa15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 C19orf43Q9BQ61 176 aa15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 NDRG4Q9ULP0 352 aaKnown RBP15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 APOBEC1P41238 236 aaKnown RBP15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 ECI1P42126 302 aa15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 P2RX1P51575 399 aa15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 OR1D5P58170 312 aa15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 GALEQ14376 348 aa15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 SFRP5Q5T4F7 317 aa15.2■□□□□ 0.02
PCDHA1-203ENST00000504120 LYSMD2Q8IV50 215 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms