RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 SPINT3P49223 89 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 STC1P52823 247 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 SLC25A11Q02978 314 aaKnown RBP4.15□□□□□ -1.75
NIPBL-203ENST00000503274 PAFAH1B3Q15102 231 aaKnown RBP4.15□□□□□ -1.75
NIPBL-203ENST00000503274 PYCR3Q53H96 274 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 PDPK2PQ6A1A2 396 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 WDR74Q6RFH5 385 aaPredicted RBP4.15□□□□□ -1.75
NIPBL-203ENST00000503274 ADAMTSL2Q86TH1 951 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 AMZ2Q86W34 360 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 OR8K1Q8NGG5 319 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 CCL4L1Q8NHW4 92 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 FNDC8Q8TC99 324 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 PIH1D2Q8WWB5 315 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 PHYHIPQ92561 330 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 ART4Q93070 314 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 CCDC42Q96M95 316 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 TTC25Q96NG3 672 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 LYSMD1Q96S90 227 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 ZSCAN5AQ9BUG6 496 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 RIOK2Q9BVS4 552 aaKnown RBP4.15□□□□□ -1.75
NIPBL-203ENST00000503274 DDA1Q9BW61 102 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 ABCG8Q9H221 673 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 CLMPQ9H6B4 373 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 CD84Q9UIB8 345 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 CELA1Q9UNI1 258 aa4.15□□□□□ -1.75
NIPBL-203ENST00000503274 ZNF256Q9Y2P7 627 aaPredicted RBP4.15□□□□□ -1.75
NIPBL-203ENST00000503274 STRAPQ9Y3F4 350 aaKnown RBP4.15□□□□□ -1.75
NIPBL-203ENST00000503274 SPTAN1Q13813 2472 aaKnown RBP4.15□□□□□ -1.75
NIPBL-203ENST00000503274 NOTCH2Q04721 2471 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 A0A087X0T9 212 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 SYCE3A1L190 88 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 LRIT2A6NDA9 550 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.14□□□□□ -1.75
NIPBL-203ENST00000503274 POLR1CO15160 346 aaPredicted RBP4.14□□□□□ -1.75
NIPBL-203ENST00000503274 KMOO15229 486 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 TOX3O15405 576 aaPredicted RBP4.14□□□□□ -1.75
NIPBL-203ENST00000503274 MFSD11O43934 449 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 FAM228BP0C875 321 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 CT45A10P0DMU9 189 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 THRAP10827 490 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 CCL4P13236 92 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 KDELR1P24390 212 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 PTPN4P29074 926 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 CD86P42081 329 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 SLC1A1P43005 524 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 OR1D4P47884 311 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 PPIDQ08752 370 aaKnown RBP4.14□□□□□ -1.75
NIPBL-203ENST00000503274 AP1B1Q10567 949 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 ASAH1Q13510 395 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 TFDP2Q14188 446 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 DPYSL3Q14195 570 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 EIF2B1Q14232 305 aaKnown RBP4.14□□□□□ -1.75
NIPBL-203ENST00000503274 MESDQ14696 234 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 C16orf72Q14CZ0 275 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 PAN3Q58A45 887 aaKnown RBP4.14□□□□□ -1.75
NIPBL-203ENST00000503274 HENMT1Q5T8I9 393 aaKnown RBP4.14□□□□□ -1.75
NIPBL-203ENST00000503274 LIPKQ5VXJ0 399 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 NCBP2-AS2Q69YL0 99 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 NT5DC3Q86UY8 548 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 VASH2Q86V25 355 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 BATF2Q8N1L9 274 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 BRSK1Q8TDC3 778 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 LRRC45Q96CN5 670 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 COX14Q96I36 57 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 RNF157Q96PX1 679 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 NDUFAF3Q9BU61 184 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 SPATA16Q9BXB7 569 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 SIRPDQ9H106 197 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 SLC25A51Q9H1U9 297 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 IKZF5Q9H5V7 419 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 GPN2Q9H9Y4 310 aaPredicted RBP4.14□□□□□ -1.75
NIPBL-203ENST00000503274 FBXO8Q9NRD0 319 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 IFNKQ9P0W0 207 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 RPH3AQ9Y2J0 694 aaPredicted RBP4.14□□□□□ -1.75
NIPBL-203ENST00000503274 DHRS7Q9Y394 339 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 HEY1Q9Y5J3 304 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 KLF2Q9Y5W3 355 aaPredicted RBP4.14□□□□□ -1.75
NIPBL-203ENST00000503274 FKBP7Q9Y680 259 aa4.14□□□□□ -1.75
NIPBL-203ENST00000503274 SPTBN1Q01082 2364 aaKnown RBP4.14□□□□□ -1.75
NIPBL-203ENST00000503274 PDZK1P1A8MUH7 402 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 NPIPA2E9PIF3 369 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 KCNK1O00180 336 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 TNFSF11O14788 317 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 CASC3O15234 703 aaKnown RBP4.13□□□□□ -1.75
NIPBL-203ENST00000503274 SPOPO43791 374 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 RAD1O60671 282 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 ZNF189O75820 626 aaPredicted RBP4.13□□□□□ -1.75
NIPBL-203ENST00000503274 CDK14O94921 469 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 SLC2A10O95528 541 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 SOD1P00441 154 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 MT-ND3P03897 115 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 GYPCP04921 128 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 HLA-DQB2P05538 268 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 XRCC1P18887 633 aaPredicted RBP4.13□□□□□ -1.75
NIPBL-203ENST00000503274 HNRNPH3P31942 346 aaKnown RBP4.13□□□□□ -1.75
NIPBL-203ENST00000503274 CASP14P31944 242 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 UGT1A3P35503 534 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 MAGEA4P43358 317 aa4.13□□□□□ -1.75
NIPBL-203ENST00000503274 XCR1P46094 333 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms