RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 TXNDC15Q96J42 360 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 ZBTB18Q99592 522 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 ZMAT3Q9HA38 289 aaKnown RBP11.86□□□□□ -0.51
CCDC58-207ENST00000498466 SAP30LQ9HAJ7 183 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 C12orf10Q9HB07 376 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 NKIRAS2Q9NYR9 191 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 KLHL14Q9P2G3 628 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 RAP2CQ9Y3L5 183 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 CACNG2Q9Y698 323 aa11.86□□□□□ -0.51
CCDC58-207ENST00000498466 PRKDCP78527 4128 aaKnown RBP11.86□□□□□ -0.51
CCDC58-207ENST00000498466 IGKV1D-42A0A075B6H8 117 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 IGLV3-9A0A075B6K5 115 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 ISPDA4D126 451 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 SERPINI2O75830 405 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 ANP32DO95626 131 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 MT-ND5P03915 603 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 SERPINE1P05121 402 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 ALDOCP09972 364 aaKnown RBP11.85□□□□□ -0.51
CCDC58-207ENST00000498466 CCL2P13500 99 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 ZNF250P15622 560 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 CSNK1A1P48729 337 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 RPL14P50914 215 aaKnown RBP11.85□□□□□ -0.51
CCDC58-207ENST00000498466 MVDP53602 400 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 ERVS71-1P61550 626 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 IL13RA1P78552 427 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 BAMBIQ13145 260 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 ARMCX4Q5H9R4 360 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 ALG10BQ5I7T1 473 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 DOK3Q7L591 496 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 PIWIL3Q7Z3Z3 882 aaKnown RBP11.85□□□□□ -0.51
CCDC58-207ENST00000498466 SKA3Q8IX90 412 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 PAQR4Q8N4S7 273 aaPredicted RBP11.85□□□□□ -0.51
CCDC58-207ENST00000498466 EIF1ADQ8N9N8 165 aaKnown RBP11.85□□□□□ -0.51
CCDC58-207ENST00000498466 ICA1LQ8NDH6 482 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 FGFBP3Q8TAT2 258 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 C11orf40Q8WZ69 217 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 SLC35B4Q969S0 331 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 ASPNQ9BXN1 380 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 CDH20Q9HBT6 801 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 SLC6A13Q9NSD5 602 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 AIG1Q9NVV5 245 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 UBAP1Q9NZ09 502 aa11.85□□□□□ -0.51
CCDC58-207ENST00000498466 VWFP04275 2813 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 A0A1B0GWA3 101 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 POM121CA8CG34 1229 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 DRD4P21917 467 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 AHCYP23526 432 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 ETV4P43268 484 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 GLO1Q04760 184 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 PUDPQ08623 228 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 PMS2P3Q13401 168 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 MOGQ16653 247 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 PDCD4Q53EL6 469 aaKnown RBP11.84□□□□□ -0.51
CCDC58-207ENST00000498466 OGFOD2Q6N063 350 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 SLC22A24Q8N4F4 322 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 SCAIQ8N9R8 606 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 ZNF519Q8TB69 540 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 ST7LQ8TDW4 575 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 DNAJA4Q8WW22 397 aaPredicted RBP11.84□□□□□ -0.51
CCDC58-207ENST00000498466 CCL17Q92583 94 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 GTF3AQ92664 365 aaKnown RBP11.84□□□□□ -0.51
CCDC58-207ENST00000498466 ELMOD3Q96FG2 381 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 SLC41A3Q96GZ6 507 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 GPA33Q99795 319 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 C20orf27Q9GZN8 174 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 RNF121Q9H920 327 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 TPT1P8Q9HAU6 139 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 THUMPD1Q9NXG2 353 aaKnown RBP11.84□□□□□ -0.51
CCDC58-207ENST00000498466 LGALS13Q9UHV8 139 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 NUP50Q9UKX7 468 aa11.84□□□□□ -0.51
CCDC58-207ENST00000498466 ENTPD5O75356 428 aa11.83□□□□□ -0.52
CCDC58-207ENST00000498466 OR8G3PP0DMU2 310 aa11.83□□□□□ -0.52
CCDC58-207ENST00000498466 MAKP20794 623 aa11.83□□□□□ -0.52
CCDC58-207ENST00000498466 HTR2AP28223 471 aa11.83□□□□□ -0.52
CCDC58-207ENST00000498466 SLC1A6P48664 564 aa11.83□□□□□ -0.52
CCDC58-207ENST00000498466 ATP4BP51164 291 aa11.83□□□□□ -0.52
CCDC58-207ENST00000498466 IFFO1Q0D2I5 559 aa11.83□□□□□ -0.52
CCDC58-207ENST00000498466 C10orf53Q8N6V4 93 aa11.83□□□□□ -0.52
CCDC58-207ENST00000498466 LSMEM1Q8N8F7 131 aa11.83□□□□□ -0.52
CCDC58-207ENST00000498466 POP5Q969H6 163 aaKnown RBP11.83□□□□□ -0.52
CCDC58-207ENST00000498466 SLC25A28Q96A46 364 aa11.83□□□□□ -0.52
CCDC58-207ENST00000498466 C1orf147Q96MC9 270 aaPredicted RBP11.83□□□□□ -0.52
CCDC58-207ENST00000498466 EPYCQ99645 322 aa11.83□□□□□ -0.52
CCDC58-207ENST00000498466 SH3GL3Q99963 347 aa11.83□□□□□ -0.52
CCDC58-207ENST00000498466 BCL2L14Q9BZR8 327 aa11.83□□□□□ -0.52
CCDC58-207ENST00000498466 MEAF6Q9HAF1 191 aa11.83□□□□□ -0.52
CCDC58-207ENST00000498466 SELENONQ9NZV5 590 aa11.83□□□□□ -0.52
CCDC58-207ENST00000498466 ZNF69Q9UC07 566 aa11.83□□□□□ -0.52
CCDC58-207ENST00000498466 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.83□□□□□ -0.52
CCDC58-207ENST00000498466 SPRY3O43610 288 aa11.82□□□□□ -0.52
CCDC58-207ENST00000498466 TYROBPO43914 113 aa11.82□□□□□ -0.52
CCDC58-207ENST00000498466 ZNF500O60304 480 aaPredicted RBP11.82□□□□□ -0.52
CCDC58-207ENST00000498466 FOXH1O75593 365 aa11.82□□□□□ -0.52
CCDC58-207ENST00000498466 FARS2O95363 451 aaKnown RBP11.82□□□□□ -0.52
CCDC58-207ENST00000498466 BGLAPP02818 100 aa11.82□□□□□ -0.52
CCDC58-207ENST00000498466 RNASE1P07998 156 aaKnown RBP11.82□□□□□ -0.52
CCDC58-207ENST00000498466 ZNF81P51508 661 aa11.82□□□□□ -0.52
CCDC58-207ENST00000498466 UCP2P55851 309 aa11.82□□□□□ -0.52
CCDC58-207ENST00000498466 BIDP55957 195 aa11.82□□□□□ -0.52
CCDC58-207ENST00000498466 NCALDP61601 193 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms