RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 CMYA5Q8N3K9 4069 aa13.72□□□□□ -0.21
MUC1-220ENST00000498431 SERPINI2O75830 405 aa13.71□□□□□ -0.21
MUC1-220ENST00000498431 IL6P05231 212 aa13.71□□□□□ -0.21
MUC1-220ENST00000498431 MDH1P40925 334 aaKnown RBP13.71□□□□□ -0.21
MUC1-220ENST00000498431 ERVS71-1P61550 626 aa13.71□□□□□ -0.21
MUC1-220ENST00000498431 RGNQ15493 299 aa13.71□□□□□ -0.21
MUC1-220ENST00000498431 NKPD1Q17RQ9 610 aa13.71□□□□□ -0.21
MUC1-220ENST00000498431 ALG10BQ5I7T1 473 aa13.71□□□□□ -0.21
MUC1-220ENST00000498431 ACSM5Q6NUN0 579 aa13.71□□□□□ -0.21
MUC1-220ENST00000498431 C5orf46Q6UWT4 87 aa13.71□□□□□ -0.21
MUC1-220ENST00000498431 NET1Q7Z628 596 aaPredicted RBP13.71□□□□□ -0.21
MUC1-220ENST00000498431 SKA3Q8IX90 412 aa13.71□□□□□ -0.21
MUC1-220ENST00000498431 LSMEM1Q8N8F7 131 aa13.71□□□□□ -0.21
MUC1-220ENST00000498431 OR6N1Q8NGY5 312 aa13.71□□□□□ -0.21
MUC1-220ENST00000498431 GTF3AQ92664 365 aaKnown RBP13.71□□□□□ -0.21
MUC1-220ENST00000498431 B3GAT2Q9NPZ5 323 aa13.71□□□□□ -0.21
MUC1-220ENST00000498431 TAAR3PQ9P1P4 343 aa13.71□□□□□ -0.21
MUC1-220ENST00000498431 SLC7A8Q9UHI5 535 aa13.71□□□□□ -0.21
MUC1-220ENST00000498431 PCDHGB1Q9Y5G3 927 aa13.71□□□□□ -0.21
MUC1-220ENST00000498431 ARHGAP32A7KAX9 2087 aa13.71□□□□□ -0.21
MUC1-220ENST00000498431 TMEM247A6NEH6 219 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 TMPRSS2O15393 492 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 TPST1O60507 370 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 SLC22A3O75751 556 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 UBL3O95164 117 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 SERPINA5P05154 406 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 FAM157BP0CG42 384 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 CCL2P13500 99 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 LIMS1P48059 325 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 GUCY1A3Q02108 690 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 PDCD4Q53EL6 469 aaKnown RBP13.7□□□□□ -0.22
MUC1-220ENST00000498431 RGS7BPQ6MZT1 257 aaPredicted RBP13.7□□□□□ -0.22
MUC1-220ENST00000498431 WDR88Q6ZMY6 472 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 MIER2Q8N344 545 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 OR9I1Q8NGQ6 314 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 BBS10Q8TAM1 723 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 C22orf15Q8WYQ4 148 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 C7orf26Q96N11 449 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 JMJD8Q96S16 334 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 WFDC6Q9BQY6 131 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 SUCNR1Q9BXA5 334 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 OR51B6Q9H340 312 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 DENND2DQ9H6A0 471 aaPredicted RBP13.7□□□□□ -0.22
MUC1-220ENST00000498431 A4GALTQ9NPC4 353 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 ZNF346Q9UL40 294 aaKnown RBP13.7□□□□□ -0.22
MUC1-220ENST00000498431 CACNG2Q9Y698 323 aa13.7□□□□□ -0.22
MUC1-220ENST00000498431 A0A0G2JMP0 313 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 A0A0X1KG70 313 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 C17orf100A8MU93 164 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 IGHV2-5P01817 119 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 KITP10721 976 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 PUDPQ08623 228 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 PMS2P3Q13401 168 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 PRR31Q5SQ13 230 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 C6orf10Q5SRN2 563 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 C10orf111Q8N326 155 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 SCAIQ8N9R8 606 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 OR4M2Q8NGB6 313 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 RNF217Q8TC41 542 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 DNAJA4Q8WW22 397 aaPredicted RBP13.69□□□□□ -0.22
MUC1-220ENST00000498431 ITCHQ96J02 903 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 ASPNQ9BXN1 380 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 PAIP1Q9H074 479 aaKnown RBP13.69□□□□□ -0.22
MUC1-220ENST00000498431 CCDC134Q9H6E4 229 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 SLC52A3Q9NQ40 469 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 HINT3Q9NQE9 182 aaKnown RBP13.69□□□□□ -0.22
MUC1-220ENST00000498431 THUMPD1Q9NXG2 353 aaKnown RBP13.69□□□□□ -0.22
MUC1-220ENST00000498431 CORINQ9Y5Q5 1042 aa13.69□□□□□ -0.22
MUC1-220ENST00000498431 IGLV3-9A0A075B6K5 115 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 ZNF726A6NNF4 738 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 PLPP3O14495 311 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 HDAC3O15379 428 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 TPST2O60704 377 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 BMP2P12643 396 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 IDO1P14902 403 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 ANPEPP15144 967 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 HOXB9P17482 250 aaPredicted RBP13.68□□□□□ -0.22
MUC1-220ENST00000498431 AHCYP23526 432 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 PRKAR1BP31321 381 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 CSNK1A1P48729 337 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 BIDP55957 195 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 UBA52P62987 128 aaKnown RBP13.68□□□□□ -0.22
MUC1-220ENST00000498431 NXNQ6DKJ4 435 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 ULK3Q6PHR2 472 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 ZNF771Q7L3S4 317 aaPredicted RBP13.68□□□□□ -0.22
MUC1-220ENST00000498431 SLC22A24Q8N4F4 322 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 TEX29Q8N6K0 151 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 OR6S1Q8NH40 331 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 NFKBIDQ8NI38 313 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 GTF2H4Q92759 462 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 SH3GL3Q99963 347 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 RMND5AQ9H871 391 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 SLCO1B3Q9NPD5 702 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 MRPL39Q9NYK5 338 aaKnown RBP13.68□□□□□ -0.22
MUC1-220ENST00000498431 OPN4Q9UHM6 478 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 WIPI2Q9Y4P8 454 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 PPIAL4AQ9Y536 164 aa13.68□□□□□ -0.22
MUC1-220ENST00000498431 VWFP04275 2813 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 A0A0B4J2E0 115 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 IGHV1-69-2A0A0G2JMI3 117 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms