RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 MTG1Q9BT17 334 aaPredicted RBP2.74□□□□□ -1.97
CALD1-224ENST00000498254 C19orf24Q9BVV8 132 aa2.74□□□□□ -1.97
CALD1-224ENST00000498254 MRPL37Q9BZE1 423 aaKnown RBP2.74□□□□□ -1.97
CALD1-224ENST00000498254 UPF3BQ9BZI7 483 aaKnown RBP2.74□□□□□ -1.97
CALD1-224ENST00000498254 GEMIN7Q9H840 131 aaKnown RBP2.74□□□□□ -1.97
CALD1-224ENST00000498254 TREM1Q9NP99 234 aa2.74□□□□□ -1.97
CALD1-224ENST00000498254 ZNF275Q9NSD4 429 aaPredicted RBP2.74□□□□□ -1.97
CALD1-224ENST00000498254 GIN1Q9NXP7 522 aa2.74□□□□□ -1.97
CALD1-224ENST00000498254 KCNIP1Q9NZI2 227 aa2.74□□□□□ -1.97
CALD1-224ENST00000498254 NUP50Q9UKX7 468 aa2.74□□□□□ -1.97
CALD1-224ENST00000498254 PACSIN2Q9UNF0 486 aaPredicted RBP2.74□□□□□ -1.97
CALD1-224ENST00000498254 UGT2A1Q9Y4X1 527 aa2.74□□□□□ -1.97
CALD1-224ENST00000498254 ROCK2O75116 1388 aaKnown RBP2.74□□□□□ -1.97
CALD1-224ENST00000498254 RLFQ13129 1914 aa2.74□□□□□ -1.97
CALD1-224ENST00000498254 SH3TC1Q8TE82 1336 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 IGHV7-81A0A0B4J1V7 117 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 ZNF879B4DU55 563 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 SUPT3HB4E1H0 165 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 RAB29O14966 203 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 CASC3O15234 703 aaKnown RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 LYPLA1O75608 230 aaPredicted RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 CRTAPO75718 401 aaPredicted RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 CSTAP01040 98 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 GIG44P09565 113 aaPredicted RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 IL32P24001 234 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 RBMXP38159 391 aaKnown RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 VDAC2P45880 294 aaPredicted RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 P2RY4P51582 365 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 UBE2IP63279 158 aaKnown RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 ACVR1Q04771 509 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 ILKQ13418 452 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 GNMTQ14749 295 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 SGCAQ16586 387 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 KYAT1Q16773 422 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 DGUOKQ16854 277 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 KLF17Q5JT82 389 aaPredicted RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 SOHLH1Q5JUK2 328 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 LY6G6FQ5SQ64 297 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 LIN9Q5TKA1 542 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 TRIM40Q6P9F5 258 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 WDR74Q6RFH5 385 aaPredicted RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 CCDC121Q6ZUS5 278 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 USP50Q70EL3 339 aaPredicted RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 BZW1Q7L1Q6 419 aaKnown RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 BIVMQ86UB2 503 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 ZNF546Q86UE3 836 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 STX12Q86Y82 276 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 SYCE1Q8N0S2 351 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 C6orf223Q8N319 242 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 GPR137CQ8N3F9 429 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 MS4A15Q8N5U1 240 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 ZNF525Q8N782 197 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 CCNYL1Q8N7R7 359 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 ZNF740Q8NDX6 193 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 OR9G1Q8NH87 305 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 CCDC12Q8WUD4 166 aaPredicted RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 DYDC1Q8WWB3 177 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 ASZ1Q8WWH4 475 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 MARC2Q969Z3 335 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 ITCHQ96J02 903 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 KCNA7Q96RP8 456 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 ATP5SQ99766 215 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 SLC29A1Q99808 456 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 PAXXQ9BUH6 204 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 SHCBP1LQ9BZQ2 653 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 POLR2J2Q9GZM3 115 aaKnown RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 POLR2J3Q9H1A7 115 aaKnown RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 LRRC19Q9H756 370 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 NIPAL2Q9H841 368 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 MRPL47Q9HD33 250 aaKnown RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 ADAP2Q9NPF8 381 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 PAQR5Q9NXK6 330 aaPredicted RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 CD274Q9NZQ7 290 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 PDP1Q9P0J1 537 aaPredicted RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 STX18Q9P2W9 335 aaKnown RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 CD300AQ9UGN4 299 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 ZNF107Q9UII5 783 aaPredicted RBP2.73□□□□□ -1.97
CALD1-224ENST00000498254 KIF25Q9UIL4 384 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 CLEC4EQ9ULY5 219 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 MOKQ9UQ07 419 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 CSAG2Q9Y5P2 127 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 NCOA3Q9Y6Q9 1424 aa2.73□□□□□ -1.97
CALD1-224ENST00000498254 RAI1Q7Z5J4 1906 aaPredicted RBP2.72□□□□□ -1.97
CALD1-224ENST00000498254 IGHV3OR16-13A0A075B7E8 117 aa2.72□□□□□ -1.97
CALD1-224ENST00000498254 KLF18A0A0U1RQI7 1052 aa2.72□□□□□ -1.97
CALD1-224ENST00000498254 ERICH2A1L162 156 aa2.72□□□□□ -1.97
CALD1-224ENST00000498254 CCDC182A6NF36 153 aa2.72□□□□□ -1.97
CALD1-224ENST00000498254 K7ERQ8 282 aa2.72□□□□□ -1.97
CALD1-224ENST00000498254 AIM2O14862 343 aa2.72□□□□□ -1.97
CALD1-224ENST00000498254 TRAPPC3O43617 180 aa2.72□□□□□ -1.97
CALD1-224ENST00000498254 CBR3O75828 277 aa2.72□□□□□ -1.97
CALD1-224ENST00000498254 TSPAN13O95857 204 aa2.72□□□□□ -1.97
CALD1-224ENST00000498254 CGAP01215 116 aa2.72□□□□□ -1.97
CALD1-224ENST00000498254 IGHV3-23P01764 117 aa2.72□□□□□ -1.97
CALD1-224ENST00000498254 KRT6AP02538 564 aa2.72□□□□□ -1.97
CALD1-224ENST00000498254 FGGP02679 453 aa2.72□□□□□ -1.97
CALD1-224ENST00000498254 ZNF43P17038 809 aa2.72□□□□□ -1.97
CALD1-224ENST00000498254 GTF2E2P29084 291 aaKnown RBP2.72□□□□□ -1.97
CALD1-224ENST00000498254 ALDH3A1P30838 453 aa2.72□□□□□ -1.97
CALD1-224ENST00000498254 VEGFCP49767 419 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms