RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 CLDN19Q8N6F1 224 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 CLDN22Q8N7P3 220 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 PROKR2Q8NFJ6 384 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 OR7G3Q8NG95 312 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 OR8J1Q8NGP2 316 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 OR1L3Q8NH93 324 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 MCFD2Q8NI22 146 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 GATAD1Q8WUU5 269 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 MRPS31Q92665 395 aaKnown RBP4.08□□□□□ -1.76
SSR3-209ENST00000498205 SLC35B4Q969S0 331 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 ESAMQ96AP7 390 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 TMEM159Q96B96 161 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 NEURL3Q96EH8 262 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 FAM71F1Q96KD3 344 aaPredicted RBP4.08□□□□□ -1.76
SSR3-209ENST00000498205 TSSK3Q96PN8 268 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 TBCDQ9BTW9 1192 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 MED18Q9BUE0 208 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 PCBD2Q9H0N5 130 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 RHBGQ9H310 441 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 ANKRD19PQ9H560 264 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 REEP4Q9H6H4 257 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 ZFP14Q9HCL3 533 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 MYO10Q9HD67 2058 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 MAN2C1Q9NTJ4 1040 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 VNN3Q9NY84 501 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 TAS2R9Q9NYW1 312 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 AHSPQ9NZD4 102 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 STOX2Q9P2F5 926 aaPredicted RBP4.08□□□□□ -1.76
SSR3-209ENST00000498205 KIF26AQ9ULI4 1882 aaPredicted RBP4.08□□□□□ -1.76
SSR3-209ENST00000498205 ABCG2Q9UNQ0 655 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 MGAT4BQ9UQ53 548 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 ANGPT4Q9Y264 503 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 ENPP4Q9Y6X5 453 aa4.08□□□□□ -1.76
SSR3-209ENST00000498205 ALPK3Q96L96 1907 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 DENND4AQ7Z401 1863 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 ARPC4-TTLL3A0A0A6YYG9 625 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 TRAV19A0A0A6YYK7 116 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 A0A1W2PRQ8 180 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 TMEM129A0AVI4 362 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 MGAT4DA6NG13 374 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 SNTNA6NMZ2 147 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 GABRR3A8MPY1 467 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 ARHGEF33A8MVX0 844 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 CENPBD1B2RD01 187 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 TMX2-CTNND1H3BSU7 103 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 J3QRK9 145 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 TNFRSF11BO00300 401 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 CCRL2O00421 344 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 FAAHO00519 579 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 SLC9A3R1O14745 358 aaPredicted RBP4.07□□□□□ -1.76
SSR3-209ENST00000498205 CASC3O15234 703 aaKnown RBP4.07□□□□□ -1.76
SSR3-209ENST00000498205 MAGEB3O15480 346 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 ADAM12O43184 909 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 PI15O43692 258 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 VEGFDO43915 354 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 GCM2O75603 506 aaPredicted RBP4.07□□□□□ -1.76
SSR3-209ENST00000498205 ZNF682O95780 498 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 GUCA1CO95843 209 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 HLA-DQB1P01920 261 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 APOA1P02647 267 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 MT-ND1P03886 318 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 RPN2P04844 631 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 ANXA4P09525 319 aaPredicted RBP4.07□□□□□ -1.76
SSR3-209ENST00000498205 ALPIP09923 528 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 ADORA3P0DMS8 318 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 LAMP1P11279 417 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 CD22P20273 847 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 UQCRC2P22695 453 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 CXCR2P25025 360 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 PSMB9P28065 219 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 IMPA1P29218 277 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 MMP12P39900 470 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 CDKN2CP42773 168 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 HNRNPKP61978 463 aaKnown RBP eCLIP4.07□□□□□ -1.76
SSR3-209ENST00000498205 IFITM3Q01628 133 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 ACSM1Q08AH1 577 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 MLLT11Q13015 90 aaPredicted RBP4.07□□□□□ -1.76
SSR3-209ENST00000498205 SGCGQ13326 291 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 DGCR6Q14129 220 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 DOC2AQ14183 400 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 GNA13Q14344 377 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 TPRG1LQ5T0D9 272 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.07□□□□□ -1.76
SSR3-209ENST00000498205 AGAP6Q5VW22 663 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 PLPP4Q5VZY2 271 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 HIST2H2AA3Q6FI13 130 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 OR4A47Q6IF82 309 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 FRMPD2BQ6IN97 320 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 REEP3Q6NUK4 255 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 MED27Q6P2C8 311 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 XKRXQ6PP77 449 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 AGTRAPQ6RW13 159 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 ISLR2Q6UXK2 745 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 TMEM64Q6YI46 380 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 PAGE2Q7Z2X7 111 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 TSEN54Q7Z6J9 526 aaKnown RBP4.07□□□□□ -1.76
SSR3-209ENST00000498205 GTSCR1Q86UQ5 136 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 HS3ST5Q8IZT8 346 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 C10orf111Q8N326 155 aa4.07□□□□□ -1.76
SSR3-209ENST00000498205 RASGEF1AQ8N9B8 481 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms