RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 SLC6A4P31645 630 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 G6PCP35575 357 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 IGFALSP35858 605 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 GLP1RP43220 463 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 FASLGP48023 281 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 F2RL1P55085 397 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 HNRNPH2P55795 449 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 RBX1P62877 108 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 GTF2BQ00403 316 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 NDPQ00604 133 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MECOMQ03112 1051 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ZFP36L1Q07352 338 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 FOXD4Q12950 439 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 FOXE3Q13461 319 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ALKBH1Q13686 389 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 CLINT1Q14677 625 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 POU2AF1Q16633 256 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CLPPQ16740 277 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 UGT8Q16880 541 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ANKDD1AQ495B1 522 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 RAET1LQ5VY80 246 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 KLHL10Q6JEL2 608 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 METAP1DQ6UB28 335 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 C17orf99Q6UX52 265 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CFAP77Q6ZQR2 320 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 Q75L30 129 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ITPRIPQ8IWB1 547 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SAXO1Q8IYX7 474 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 BVESQ8NE79 360 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SEMA6DQ8NFY4 1073 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 OR7G2Q8NG99 324 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PLBD2Q8NHP8 589 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 GHSRQ92847 366 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 DAZLQ92904 295 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 APOBEC3DQ96AK3 386 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 ZNF689Q96CS4 500 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 ARHGEF26Q96DR7 871 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PRAC1Q96KF2 57 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 HIST1H2AHQ96KK5 128 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 C1orf147Q96MC9 270 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 HIST1H2AJQ99878 128 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 APOL2Q9BQE5 337 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SARGQ9BW04 601 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 RIBC2Q9H4K1 309 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TMEM27Q9HBJ8 222 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 OBP2BQ9NPH6 170 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 NECTIN3Q9NQS3 549 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ASH2LQ9UBL3 628 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SH2B3Q9UQQ2 575 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ATP23Q9Y6H3 246 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SCN5AQ14524 2016 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MGAMO43451 1857 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 FRMPD2Q68DX3 1309 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 A0A0A6YYC8 382 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 MDFIC2A0A1B0GVS7 189 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 A0A1W2PPM0 123 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 OR6C74A6NCV1 312 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 WASH3PC4AMC7 463 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CLDN25C9JDP6 229 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 I3L1I5 382 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 GFRA2O00451 464 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SOCS6O14544 535 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CTDSP2O14595 271 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PTP4A3O75365 173 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CRYZL1O95825 349 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TIMP1P01033 207 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MMP1P03956 469 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 OR4A8P0C604 315 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 IGHV4-38-2P0DP08 117 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 FABP2P12104 132 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 LYL1P12980 280 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 FAHP16930 419 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SRD5A1P18405 259 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ATF1P18846 271 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 GSTM3P21266 225 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 GIFP27352 417 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 MDH2P40926 338 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 SLC1A4P43007 532 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 NPY2RP49146 381 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ALDH7A1P49419 539 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 CCR9P51686 369 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TPI1P60174 286 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PSME3P61289 254 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PITX1P78337 314 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 ELF3P78545 371 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 MRPS11P82912 194 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 EFNB1P98172 346 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 LAMTOR4Q0VGL1 99 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CYLC2Q14093 348 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 POLD3Q15054 466 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 NKG7Q16617 165 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 VPS53Q5VIR6 699 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SCARA5Q6ZMJ2 495 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SLC16A12Q6ZSM3 486 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ZNF534Q76KX8 674 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 REC114Q7Z4M0 266 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 WDR5BQ86VZ2 330 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TEN1Q86WV5 123 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ZNF677Q86XU0 584 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SLC30A8Q8IWU4 369 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms