RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 MRPS23Q9Y3D9 190 aaKnown RBP9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 LOC285556D6RIA3 1793 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 A0A1W2PRU2 124 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 SLC5A10A0PJK1 596 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 EMC8O43402 210 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 SCGB1D2O95969 90 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 THY1P04216 161 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 IL9P15248 144 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 MUC1P15941 1255 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 SLC6A6P31641 620 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 KIAA0141Q14154 515 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 JMJD6Q6NYC1 403 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 RPL22L1Q6P5R6 122 aaKnown RBP9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 LCTLQ6UWM7 567 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 WDR88Q6ZMY6 472 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 SLC35F3Q8IY50 421 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 KLHDC8AQ8IYD2 350 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 GALNT16Q8N428 558 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 HAVCR1Q96D42 359 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 INTS14Q96SY0 518 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 FBXO34Q9NWN3 711 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 KLHL42Q9P2K6 505 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 CGGBP1Q9UFW8 167 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 PATJQ8NI35 1801 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 MYO9BQ13459 2157 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 A0A1W2PR48 441 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 TMEM235A6NFC5 223 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 C4orf47A7E2U8 309 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 ZNF736B4DX44 427 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 DCTN6O00399 190 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 CLN5O75503 358 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 AIFM1O95831 613 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 RAB40ALP0C0E4 278 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 PSMA3P25788 255 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 ACSM1Q08AH1 577 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 TMCO2Q7Z6W1 182 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 TMEM150AQ86TG1 271 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 PPP1R3BQ86XI6 285 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 TMEM25Q86YD3 366 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 ZNF565Q8N9K5 539 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 ZNF383Q8NA42 475 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 OR4K17Q8NGC6 315 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 RNF141Q8WVD5 230 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 RAB40AQ8WXH6 277 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 SLAMF9Q96A28 289 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 SLC35A4Q96G79 324 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 POM121Q96HA1 1249 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 LURAP1Q96LR2 239 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 LMAN2LQ9H0V9 348 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 KCNK7Q9Y2U2 307 aa9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 PUS1Q9Y606 427 aaKnown RBP eCLIP9.72□□□□□ -0.85
TRAPPC12-223ENST00000497597 TRAV1-2A0A0B4J238 106 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 TSPAN11A1L157 253 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 INHAP05111 366 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 ACTA2P62736 377 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 ACTG2P63267 376 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 RNF212Q495C1 297 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 ACTBL2Q562R1 376 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 RNASE10Q5GAN6 216 aaKnown RBP9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 ZNF529Q6P280 563 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 OVCH1Q7RTY7 1134 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 ZNF467Q7Z7K2 595 aaPredicted RBP9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 BAP18Q8IXM2 172 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 GABRG1Q8N1C3 465 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 FRMD1Q8N878 549 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 ACOT4Q8N9L9 421 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 OR5T3Q8NGG3 340 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 ROBO4Q8WZ75 1007 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 TIMP4Q99727 224 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 SLC23A2Q9UGH3 650 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 ST6GALNAC2Q9UJ37 374 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 OR51B4Q9Y5P0 310 aa9.71□□□□□ -0.85
TRAPPC12-223ENST00000497597 OR2F2O95006 317 aa9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 ABOP16442 354 aa9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 DPP4P27487 766 aa9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 MAP3K8P41279 467 aa9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 METAP1P53582 386 aa9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 NANOS3P60323 173 aaKnown RBP9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 OR2F1Q13607 317 aa9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 CCINQ13939 588 aa9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 LIPNQ5VXI9 398 aa9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 LEG1Q6P5S2 330 aa9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 ZNF793Q6ZN11 406 aa9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 OR10D4PQ8NGN7 298 aa9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 OR13C9Q8NGT0 318 aa9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 SGK3Q96BR1 496 aa9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 STEAP1Q9UHE8 339 aa9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 ZNF223Q9UK11 482 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 ICKQ9UPZ9 632 aa9.71□□□□□ -0.86
TRAPPC12-223ENST00000497597 TRAV8-7A0A075B6U6 113 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 LRP3O75074 770 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 GLSO94925 669 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 SLC35G4P0C7Q5 338 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 FKBP1BP68106 108 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 ZNF674Q2M3X9 581 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 FAM111BQ6SJ93 734 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 SLC35D2Q76EJ3 337 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 PXKQ7Z7A4 578 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 ZNF584Q8IVC4 421 aa9.7□□□□□ -0.86
TRAPPC12-223ENST00000497597 DND1Q8IYX4 353 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms