RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 SECTM1Q8WVN6 248 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 IL1F10Q8WWZ1 152 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 TM9SF4Q92544 642 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 TAF15Q92804 592 aaKnown RBP eCLIP2□□□□□ -2.09
CKS1BP2-201ENST00000497342 UBE2E3Q969T4 207 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 C18orf25Q96B23 403 aaPredicted RBP2□□□□□ -2.09
CKS1BP2-201ENST00000497342 SGK3Q96BR1 496 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 C8orf44Q96CB5 159 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR4F4Q96R69 305 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 PANX1Q96RD7 426 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 IL4I1Q96RQ9 567 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 GABRG3Q99928 467 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 PSD2Q9BQI7 771 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 TMEM204Q9BSN7 226 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 TRIM62Q9BVG3 475 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 SPATA16Q9BXB7 569 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 RAB34Q9BZG1 259 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 IQCGQ9H095 443 aaKnown RBP2□□□□□ -2.09
CKS1BP2-201ENST00000497342 LINC00597Q9H2U6 94 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 C6orf106Q9H6K1 298 aaPredicted RBP2□□□□□ -2.09
CKS1BP2-201ENST00000497342 SUDS3Q9H7L9 328 aaPredicted RBP2□□□□□ -2.09
CKS1BP2-201ENST00000497342 NT5DC2Q9H857 520 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 GOLGA2P5Q9HBQ8 144 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 TMEM165Q9HC07 324 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 UBE2TQ9NPD8 197 aaPredicted RBP2□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF446Q9NWS9 450 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 TEX10Q9NXF1 929 aaPredicted RBP2□□□□□ -2.09
CKS1BP2-201ENST00000497342 B3GNT2Q9NY97 397 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 IL36GQ9NZH8 169 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 TMEM181Q9P2C4 612 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 LNPEPQ9UIQ6 1025 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 IKZF2Q9UKS7 526 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 ERVW-1Q9UQF0 538 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 MEMO1Q9Y316 297 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 STARD10Q9Y365 291 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 DOCK7Q96N67 2140 aa2□□□□□ -2.09
CKS1BP2-201ENST00000497342 DNAH9Q9NYC9 4486 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 LYSTQ99698 3801 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 DOCK5Q9H7D0 1870 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 MYO5AQ9Y4I1 1855 aaKnown RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 HECTD4Q9Y4D8 3996 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 IGHV3OR16-12A0A075B7B8 117 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 A0A087WW49 117 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 TRBV9A0A0B4J1U6 114 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 FAM172BPA6NC97 362 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 MYMKA6NI61 221 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 E9PQ18 207 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 G3V4G9 280 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 GOLGA8TH3BQL2 631 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 TMX2-CTNND1H3BSU7 103 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 ABCD4O14678 606 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 B4GAT1O43505 415 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 CXCL13O43927 109 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 H6PDO95479 791 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 CA1P00915 261 aaPredicted RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 CRYABP02511 175 aaKnown RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 APODP05090 189 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 SERPINE2P07093 398 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 ACAA1P09110 424 aaPredicted RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 COX5AP20674 150 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 PRKACBP22694 351 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 STOMP27105 288 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 GABRR2P28476 465 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 CASP14P31944 242 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 UGT1A3P35503 534 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 RPL13AP40429 203 aaKnown RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 PTGDSP41222 190 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 GDF5P43026 501 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 POU3F4P49335 361 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 ATP1B3P54709 279 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 RPS14P62263 151 aaKnown RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 RAB11AP62491 216 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 NOP14P78316 857 aaKnown RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 LIPEQ05469 1076 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF33BQ06732 778 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 ELAVL2Q12926 359 aaKnown RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 EIF2B1Q14232 305 aaKnown RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 GRB7Q14451 532 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 ITIH4Q14624 930 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 MTF1Q14872 753 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 RAB35Q15286 201 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 SYCP1Q15431 976 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 RAB11BQ15907 218 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 NDUFA9Q16795 377 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 C17orf58Q2M2W7 97 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 PGGHGQ32M88 737 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 CHRFAM7AQ494W8 412 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF672Q499Z4 452 aaPredicted RBP1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 TMEM53Q6P2H8 277 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 PNCKQ6P2M8 343 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 ADAMTSL5Q6ZMM2 481 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 C9orf139Q6ZV77 190 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 ACOT1Q86TX2 421 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 SLC47A2Q86VL8 602 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 APRG1Q8IVJ8 170 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 CCDC50Q8IVM0 306 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 MICU2Q8IYU8 434 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 LINC01561Q8N1V8 128 aa1.99□□□□□ -2.09
CKS1BP2-201ENST00000497342 SVOPLQ8N434 492 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms