RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 PHC2Q8IXK0 858 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 ZNF540Q8NDQ6 660 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 SLC26A7Q8TE54 656 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 ADAMTS16Q8TE57 1224 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 NEU4Q8WWR8 484 aaPredicted RBP11.18□□□□□ -0.62
FN1-226ENST00000496542 TMEM158Q8WZ71 300 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 TAMM41Q96BW9 452 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 TPK1Q9H3S4 243 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 KAT8Q9H7Z6 458 aaKnown RBP11.18□□□□□ -0.62
FN1-226ENST00000496542 ZNF224Q9NZL3 707 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 SPEF1Q9Y4P9 236 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 LRP5LA4QPB2 252 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 UBL3O95164 117 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 TGFAP01135 160 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 HIST1H2ABP04908 130 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 UMPSP11172 480 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 ZNF14P17017 642 aaPredicted RBP11.17□□□□□ -0.62
FN1-226ENST00000496542 SRD5A1P18405 259 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 MELKQ14680 651 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 MSMPQ1L6U9 139 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 FAM120AOSQ5T036 256 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 INTS11Q5TA45 600 aaKnown RBP11.17□□□□□ -0.62
FN1-226ENST00000496542 GKAP1Q5VSY0 366 aaPredicted RBP11.17□□□□□ -0.62
FN1-226ENST00000496542 HIST3H2AQ7L7L0 130 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 ZNF627Q7L945 461 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 LRRC17Q8N6Y2 441 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 OR6X1Q8NH79 312 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 TSPEARQ8WU66 669 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 HIST1H2ACQ93077 130 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 MRPL24Q96A35 216 aaKnown RBP11.17□□□□□ -0.62
FN1-226ENST00000496542 SYT3Q9BQG1 590 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 MRPL37Q9BZE1 423 aaKnown RBP11.17□□□□□ -0.62
FN1-226ENST00000496542 NANSQ9NR45 359 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 TAS2R5Q9NYW4 299 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 GLTPQ9NZD2 209 aa11.17□□□□□ -0.62
FN1-226ENST00000496542 LYNX1G3V0Z9 82 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 FBP2O00757 339 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 IGFBP1P08833 259 aaPredicted RBP11.16□□□□□ -0.62
FN1-226ENST00000496542 PATE4P0C8F1 98 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 LYNX1P0DP58 116 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 ZNF35P13682 527 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 HNF1AP20823 631 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 GIFP27352 417 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 LSP1P33241 339 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 RPS23P62266 143 aaKnown RBP11.16□□□□□ -0.62
FN1-226ENST00000496542 RAB1AP62820 205 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 GALK2Q01415 458 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 RAB39AQ14964 217 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 VMACQ2NL98 169 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 NANOGNBQ7Z5D8 188 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 SKA3Q8IX90 412 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 UBASH3BQ8TF42 649 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 TMEM54Q969K7 222 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 ZNF566Q969W8 418 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 MPP4Q96JB8 637 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 ZNF75AQ96N20 296 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 SNX18Q96RF0 628 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 SIKE1Q9BRV8 207 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 SOX7Q9BT81 388 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 DENND2DQ9H6A0 471 aaPredicted RBP11.16□□□□□ -0.62
FN1-226ENST00000496542 ZNF229Q9UJW7 825 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 FZR1Q9UM11 496 aa11.16□□□□□ -0.62
FN1-226ENST00000496542 M0R233 179 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 SYNGR3O43761 229 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 VIMP08670 466 aaKnown RBP11.15□□□□□ -0.62
FN1-226ENST00000496542 TCN1P20061 433 aaPredicted RBP11.15□□□□□ -0.62
FN1-226ENST00000496542 TNFRSF1BP20333 461 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 APEX1P27695 318 aaKnown RBP11.15□□□□□ -0.62
FN1-226ENST00000496542 IL2RGP31785 369 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 ALDH3B1P43353 468 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 GZMMP51124 257 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 CHN2P52757 468 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 CRYBA2P53672 197 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 ZP4Q12836 540 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 CYLC2Q14093 348 aaPredicted RBP11.15□□□□□ -0.62
FN1-226ENST00000496542 RABL3Q5HYI8 236 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 NANOGP8Q6NSW7 305 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 DEF8Q6ZN54 512 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 PIWIL3Q7Z3Z3 882 aaKnown RBP11.15□□□□□ -0.62
FN1-226ENST00000496542 CARM1Q86X55 608 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 ZNF786Q8N393 782 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 SLC22A24Q8N4F4 322 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 FGFBP3Q8TAT2 258 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 RASSF5Q8WWW0 418 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 SLC25A44Q96H78 314 aaPredicted RBP11.15□□□□□ -0.62
FN1-226ENST00000496542 SH3GL3Q99963 347 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 ZNF426Q9BUY5 554 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 TMEM120AQ9BXJ8 343 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 SLC19A3Q9BZV2 496 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 PCDHAC1Q9H158 963 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 VIPAS39Q9H9C1 493 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 NANOGQ9H9S0 305 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 TMEM38BQ9NVV0 291 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 ARGLU1Q9NWB6 273 aaPredicted RBP11.15□□□□□ -0.62
FN1-226ENST00000496542 REV1Q9UBZ9 1251 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 FBXL3Q9UKT7 428 aa11.15□□□□□ -0.62
FN1-226ENST00000496542 NBEAL1Q6ZS30 2694 aa11.14□□□□□ -0.63
FN1-226ENST00000496542 A0A1W2PPW3 197 aa11.14□□□□□ -0.63
FN1-226ENST00000496542 MCIDASD6RGH6 385 aa11.14□□□□□ -0.63
FN1-226ENST00000496542 BLOC1S5-TXNDC5H3BN57 136 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms