RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 ZNF416Q9BWM5 594 aa5.9□□□□□ -1.46
CHCHD3-206ENST00000496427 MS4A5Q9H3V2 200 aa5.9□□□□□ -1.46
CHCHD3-206ENST00000496427 SLC52A3Q9NQ40 469 aa5.9□□□□□ -1.46
CHCHD3-206ENST00000496427 DDX28Q9NUL7 540 aaKnown RBP5.9□□□□□ -1.46
CHCHD3-206ENST00000496427 MED29Q9NX70 200 aa5.9□□□□□ -1.46
CHCHD3-206ENST00000496427 ASIC5Q9NY37 505 aa5.9□□□□□ -1.46
CHCHD3-206ENST00000496427 TAAR3PQ9P1P4 343 aa5.9□□□□□ -1.46
CHCHD3-206ENST00000496427 OPN4Q9UHM6 478 aa5.9□□□□□ -1.46
CHCHD3-206ENST00000496427 RCE1Q9Y256 329 aa5.9□□□□□ -1.46
CHCHD3-206ENST00000496427 WIPI2Q9Y4P8 454 aa5.9□□□□□ -1.46
CHCHD3-206ENST00000496427 NOX1Q9Y5S8 564 aa5.9□□□□□ -1.46
CHCHD3-206ENST00000496427 NOTCH1P46531 2555 aa5.9□□□□□ -1.47
CHCHD3-206ENST00000496427 A0A0G2JK05 382 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 CCDC154A6NI56 674 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 E9PBE3 544 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 SERPINI2O75830 405 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 RAB36O95755 333 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 ETFAP13804 333 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 IL12AP29459 219 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 GRPRP30550 384 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 S100A3P33764 101 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 EVX1P49640 407 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 MAP2K6P52564 334 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 TMEM33P57088 247 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 COPZ1P61923 177 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 UFM1P61960 85 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 LCN2P80188 198 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 GALK2Q01415 458 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 SRSF4Q08170 494 aaKnown RBP5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 CAMK2DQ13557 499 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 C1DQ13901 141 aaKnown RBP5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 GNA13Q14344 377 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 MFSD13AQ14CX5 517 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 TSTQ16762 297 aaKnown RBP5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 GSTA3Q16772 222 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 ANXA8L1Q5VT79 327 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 RGS7BPQ6MZT1 257 aaPredicted RBP5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 ZNF621Q6ZSS3 439 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 USP51Q70EK9 711 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 ZNF584Q8IVC4 421 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 IFT20Q8IY31 132 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 ZNF440Q8IYI8 595 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 LRRC34Q8IZ02 419 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 BCL6BQ8N143 479 aaPredicted RBP5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 ICA1LQ8NDH6 482 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 PIK3C3Q8NEB9 887 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 MNS1Q8NEH6 495 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 MFSD8Q8NHS3 518 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 NANPQ8TBE9 248 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 MGARPQ8TDB4 240 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 STK35Q8TDR2 534 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 TCP10LQ8TDR4 215 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 DVL3Q92997 716 aaPredicted RBP5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 TAAR8Q969N4 342 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 TESCQ96BS2 214 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 LRRC58Q96CX6 371 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 RAB39BQ96DA2 213 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 TXNDC15Q96J42 360 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 ZNF48Q96MX3 618 aaPredicted RBP5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 CCDC115Q96NT0 180 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 OXGR1Q96P68 337 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 ZNF385DQ9H6B1 395 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 MOV10Q9HCE1 1003 aaKnown RBP5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 SLC6A13Q9NSD5 602 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 MKS1Q9NXB0 559 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 ZNF69Q9UC07 566 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 SOX21Q9Y651 276 aaPredicted RBP5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 DSPPQ9NZW4 1301 aa5.89□□□□□ -1.47
CHCHD3-206ENST00000496427 IGKV1D-42A0A075B6H8 117 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 IGHV1-69-2A0A0G2JMI3 117 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 ISPDA4D126 451 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 WDR91A4D1P6 747 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 C17orf100A8MU93 164 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 LRRN3E7EW58 273 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 MS4A18H0YCH9 400 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 AIM2O14862 343 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 AKAP8O43823 692 aaKnown RBP5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 RNASE1P07998 156 aaKnown RBP5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 ALDOCP09972 364 aaKnown RBP5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 MAKP20794 623 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 MDKP21741 143 aaPredicted RBP5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 OMGP23515 440 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 RPS23P62266 143 aaKnown RBP5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 RAB1AP62820 205 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 MS4A18Q3C1V0 323 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 GTDC1Q4AE62 458 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 SPRNQ5BIV9 151 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 TMEM255AQ5JRV8 349 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 RNF220Q5VTB9 566 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 REP15Q6BDI9 236 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 COMTD1Q86VU5 262 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 UEVLDQ8IX04 471 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 C20orf196Q8IYI0 205 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 MIER2Q8N344 545 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 LRRC17Q8N6Y2 441 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 VPS37AQ8NEZ2 397 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 IL17RDQ8NFM7 739 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 TMEM19Q96HH6 336 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 DMRTB1Q96MA1 342 aa5.88□□□□□ -1.47
CHCHD3-206ENST00000496427 PANX1Q96RD7 426 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms