RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 SMPDL3AQ92484 453 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 SMPDL3BQ92485 455 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 GCDHQ92947 438 aaPredicted RBP8.29□□□□□ -1.08
HPS4-217ENST00000496385 MISP3Q96FF7 219 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 TCTN2Q96GX1 697 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 DERL3Q96Q80 235 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 SULT4A1Q9BR01 284 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 EFCAB11Q9BUY7 163 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 TDP1Q9NUW8 608 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 CALML5Q9NZT1 146 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 CNIH4Q9P003 139 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 MARCH2Q9P0N8 246 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 TAAR2Q9P1P5 351 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 GDF2Q9UK05 429 aaPredicted RBP8.29□□□□□ -1.08
HPS4-217ENST00000496385 ASF1AQ9Y294 204 aa8.29□□□□□ -1.08
HPS4-217ENST00000496385 MRPS23Q9Y3D9 190 aaKnown RBP8.29□□□□□ -1.08
HPS4-217ENST00000496385 C7orf77A4D0Y5 90 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 FAM157AC9JC47 383 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 STMND1H3BQB6 276 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 RPL36A-HNRNPH2H7BZ11 118 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 FCGR3AP08637 254 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 NR2F1P10589 423 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 TIMP2P16035 220 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 CD34P28906 385 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 FRKP42685 505 aaPredicted RBP8.28□□□□□ -1.08
HPS4-217ENST00000496385 GSK3AP49840 483 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 ADPRHP54922 357 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 MANFP55145 182 aaKnown RBP8.28□□□□□ -1.08
HPS4-217ENST00000496385 CASP6P55212 293 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 RPS11P62280 158 aaKnown RBP eCLIP8.28□□□□□ -1.08
HPS4-217ENST00000496385 LSM11P83369 360 aaKnown RBP eCLIP8.28□□□□□ -1.08
HPS4-217ENST00000496385 ELAVL1Q15717 326 aaKnown RBP8.28□□□□□ -1.08
HPS4-217ENST00000496385 KRBOX4Q5JUW0 171 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 NCMAPQ5T1S8 102 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 NKAIN2Q5VXU1 208 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 LCTLQ6UWM7 567 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 MBOAT2Q6ZWT7 520 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 LRRTM1Q86UE6 522 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 TGIF2LXQ8IUE1 241 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 ZNF511Q8NB15 262 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 OR5T3Q8NGG3 340 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 OR10R2Q8NGX6 335 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 OR56A3Q8NH54 315 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 C2orf15Q8WU43 125 aaKnown RBP8.28□□□□□ -1.08
HPS4-217ENST00000496385 PPP1R1CQ8WVI7 109 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 SKA2Q8WVK7 121 aaPredicted RBP8.28□□□□□ -1.08
HPS4-217ENST00000496385 DIO2Q92813 273 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 KIRREL1Q96J84 757 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 MICU1Q9BPX6 476 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 RSRP1Q9BUV0 290 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 TMEM231Q9H6L2 316 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 MEPEQ9NQ76 525 aaPredicted RBP8.28□□□□□ -1.08
HPS4-217ENST00000496385 OR5V1Q9UGF6 321 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 ZNF107Q9UII5 783 aaPredicted RBP8.28□□□□□ -1.08
HPS4-217ENST00000496385 BDP1A6H8Y1 2624 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 A6NLC8 198 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 OR52A4PA6NMU1 304 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 EIF1AYO14602 144 aaKnown RBP8.28□□□□□ -1.08
HPS4-217ENST00000496385 PAPLNO95428 1278 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 MBP02144 154 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 CTSLP07711 333 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 HCKP08631 526 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 HNRNPA1P09651 372 aaKnown RBP eCLIP8.28□□□□□ -1.08
HPS4-217ENST00000496385 NME1P15531 152 aaKnown RBP8.28□□□□□ -1.08
HPS4-217ENST00000496385 EIF1AXP47813 144 aaKnown RBP8.28□□□□□ -1.08
HPS4-217ENST00000496385 OR12D2P58182 307 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 ACTBP60709 375 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 ACTG1P63261 375 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 SIRPAP78324 504 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 MLC1Q15049 377 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 ADAM5Q6NVV9 412 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 DPPA4Q7L190 304 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 DCXRQ7Z4W1 244 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 TMEM150AQ86TG1 271 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 PAQR4Q8N4S7 273 aaPredicted RBP8.28□□□□□ -1.08
HPS4-217ENST00000496385 UBAC2Q8NBM4 344 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 OR52L1Q8NGH7 329 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 OR51S1Q8NGJ8 323 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 OR1J1Q8NGS3 322 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 ADAMTS17Q8TE56 1095 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 RSC1A1Q92681 617 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 RAB8BQ92930 207 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 FBXO32Q969P5 355 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 R3HDM4Q96D70 268 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 SLC22A12Q96S37 553 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 MYADMQ96S97 322 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 TBX5Q99593 518 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 ARHGDIGQ99819 225 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 SLC17A9Q9BYT1 436 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 POFUT1Q9H488 388 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 ANKRD10Q9NXR5 420 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 KCNE5Q9UJ90 142 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 LHX6Q9UPM6 363 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 SLC27A6Q9Y2P4 619 aa8.28□□□□□ -1.08
HPS4-217ENST00000496385 HELZP42694 1942 aaKnown RBP8.28□□□□□ -1.08
HPS4-217ENST00000496385 KIF26AQ9ULI4 1882 aaPredicted RBP8.28□□□□□ -1.08
HPS4-217ENST00000496385 TVP23AA6NH52 213 aa8.27□□□□□ -1.08
HPS4-217ENST00000496385 MARCH11A6NNE9 402 aa8.27□□□□□ -1.08
HPS4-217ENST00000496385 H7C1Q1 480 aa8.27□□□□□ -1.08
HPS4-217ENST00000496385 MOSPD3O75425 235 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms