RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 CBR1P16152 277 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 KDELR2P33947 212 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 YAP1P46937 504 aaKnown RBP9.26□□□□□ -0.93
COL6A3-214ENST00000493608 IDH3GP51553 393 aaPredicted RBP9.26□□□□□ -0.93
COL6A3-214ENST00000493608 NUDT6P53370 316 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 SH3BGRP55822 239 aaPredicted RBP9.26□□□□□ -0.93
COL6A3-214ENST00000493608 TAS2R41P59536 307 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 NAAAQ02083 359 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 NPRL3Q12980 569 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 MELKQ14680 651 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 MST1LQ2TV78 715 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 CYBRD1Q53TN4 286 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 ZNF544Q6NX49 715 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 SLC35D2Q76EJ3 337 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 HIST3H2AQ7L7L0 130 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 PXKQ7Z7A4 578 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 MDP1Q86V88 176 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 MICU2Q8IYU8 434 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 OR2T12Q8NG77 320 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 MAGEE2Q8TD90 523 aaPredicted RBP9.26□□□□□ -0.93
COL6A3-214ENST00000493608 TMEM255BQ8WV15 326 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 HIST1H2ACQ93077 130 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 PCDHAC1Q9H158 963 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 MED4Q9NPJ6 270 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 MRGBPQ9NV56 204 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 RIMS3Q9UJD0 308 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 BAG5Q9UL15 447 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 POFUT2Q9Y2G5 429 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 HIVEP2P31629 2446 aa9.26□□□□□ -0.93
COL6A3-214ENST00000493608 CHD3Q12873 2000 aaKnown RBP9.26□□□□□ -0.93
COL6A3-214ENST00000493608 IGHV4-30-2A0A087WSY4 118 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 ELOVL7A1L3X0 281 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 FAM220BPB1ANY3 271 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 IGLV1-44P01699 117 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 PATE4P0C8F1 98 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 B4GALT1P15291 398 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 FUT1P19526 365 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 FUT4P22083 530 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 CSNK1A1P48729 337 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 SEC24CP53992 1094 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 UGT2B15P54855 530 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 HGFACQ04756 655 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 CHRNB3Q05901 458 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 ETFDHQ16134 617 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 ERICH5Q6P6B1 374 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 ZNF813Q6ZN06 617 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 DNM1P46Q6ZS02 220 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 SLC46A3Q7Z3Q1 461 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 VTCN1Q7Z7D3 282 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 SLC15A3Q8IY34 581 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 ZNF525Q8N782 197 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 RP9Q8TA86 221 aaKnown RBP9.25□□□□□ -0.93
COL6A3-214ENST00000493608 MPP4Q96JB8 637 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 LRR1Q96L50 414 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 ELAC2Q9BQ52 826 aaKnown RBP9.25□□□□□ -0.93
COL6A3-214ENST00000493608 RHNO1Q9BSD3 238 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 ZNF426Q9BUY5 554 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 KATNB1Q9BVA0 655 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 ULBP2Q9BZM5 246 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 FAM107BQ9H098 131 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 BARX1Q9HBU1 254 aaPredicted RBP9.25□□□□□ -0.93
COL6A3-214ENST00000493608 NOX3Q9HBY0 568 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 B3GAT2Q9NPZ5 323 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 C20orf141Q9NUB4 165 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 CRNNQ9UBG3 495 aaPredicted RBP9.25□□□□□ -0.93
COL6A3-214ENST00000493608 PMF1-BGLAPU3KQ54 211 aa9.25□□□□□ -0.93
COL6A3-214ENST00000493608 SONP18583 2426 aaKnown RBP9.24□□□□□ -0.93
COL6A3-214ENST00000493608 GPRIN2O60269 458 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 PIP5K1CO60331 668 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 DEAF1O75398 565 aaPredicted RBP9.24□□□□□ -0.93
COL6A3-214ENST00000493608 IFNA14P01570 189 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 IGKV3-15P01624 115 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 MT-ND1P03886 318 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 F13BP05160 661 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 OR4A8P0C604 315 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 ASAH2BP0C7U1 165 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 THBS4P35443 961 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 SERPINF1P36955 418 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 AQP2P41181 271 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 SELENOWP63302 87 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 MYBPC1Q00872 1141 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 LIPEQ05469 1076 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 KRTAP1-1Q07627 177 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 ZP4Q12836 540 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 ADIPOQQ15848 244 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 C1QTNF12Q5T7M4 302 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 NANOGNBQ7Z5D8 188 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 MEX3DQ86XN8 651 aaKnown RBP9.24□□□□□ -0.93
COL6A3-214ENST00000493608 OR6X1Q8NH79 312 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 FGFBP3Q8TAT2 258 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 TMEM239Q8WW34 195 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 SGTBQ96EQ0 304 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 VRK1Q99986 396 aaPredicted RBP9.24□□□□□ -0.93
COL6A3-214ENST00000493608 CA10Q9NS85 328 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 B3GNT2Q9NY97 397 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 GLTPQ9NZD2 209 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 RHCGQ9UBD6 479 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 ZNF229Q9UJW7 825 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 SNX13Q9Y5W8 968 aa9.24□□□□□ -0.93
COL6A3-214ENST00000493608 IGHV2OR16-5A0A0B4J2B6 119 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms