RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 MRPL39Q9NYK5 338 aaKnown RBP5.95□□□□□ -1.46
VPS52-219ENST00000493379 B3GAT1Q9P2W7 334 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 RPS6KB2Q9UBS0 482 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 GPR160Q9UJ42 338 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 SLC7A7Q9UM01 511 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 RASD1Q9Y272 281 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 FLVCR1Q9Y5Y0 555 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 A0A087WUU8 490 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 A0A0G2JK05 382 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 NPIPB13A6NJU9 1138 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 CPSF4LA6NMK7 179 aaKnown RBP5.94□□□□□ -1.46
VPS52-219ENST00000493379 NPIPB4C9JG80 1138 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 RPL36A-HNRNPH2H7BZ11 118 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 PLPP3O14495 311 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 GYG2O15488 501 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 RAMP1O60894 148 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 GMNNO75496 209 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 AHSA1O95433 338 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 DBHP09172 617 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 TFPIP10646 304 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 UMPSP11172 480 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 ITGA2P17301 1181 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 TNFRSF1BP20333 461 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 PSMB1P20618 241 aaKnown RBP5.94□□□□□ -1.46
VPS52-219ENST00000493379 BMP5P22003 454 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 MSX2P35548 267 aaPredicted RBP5.94□□□□□ -1.46
VPS52-219ENST00000493379 CD79BP40259 229 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 RPS5P46782 204 aaKnown RBP5.94□□□□□ -1.46
VPS52-219ENST00000493379 OR2B6P58173 313 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 NCALDP61601 193 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 PRKCDQ05655 676 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 GK3PQ14409 553 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 P2RY6Q15077 328 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 OR7A5Q15622 319 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 ZNF74Q16587 644 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 ANKDD1AQ495B1 522 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 TTC33Q6PID6 262 aaPredicted RBP5.94□□□□□ -1.46
VPS52-219ENST00000493379 TFAP2EQ6VUC0 442 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 STAC2Q6ZMT1 411 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 Q6ZT83 130 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 TMPRSS11FQ6ZWK6 438 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 CREB3L2Q70SY1 520 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 SLC46A3Q7Z3Q1 461 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 NUFIP2Q7Z417 695 aaKnown RBP5.94□□□□□ -1.46
VPS52-219ENST00000493379 GALNT5Q7Z7M9 940 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 DHFR2Q86XF0 187 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 EPHX4Q8IUS5 362 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 GCNT2Q8N0V5 402 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 ATP6V1C2Q8NEY4 427 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 TMEM239Q8WW34 195 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 ACOT11Q8WXI4 607 aaPredicted RBP5.94□□□□□ -1.46
VPS52-219ENST00000493379 DUS3LQ96G46 650 aaKnown RBP5.94□□□□□ -1.46
VPS52-219ENST00000493379 TPD52L3Q96J77 140 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 LRR1Q96L50 414 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 MOGAT1Q96PD6 335 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 SEPHS2Q99611 448 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 TAPBPLQ9BX59 468 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 HDHD5Q9BXW7 423 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 CADM1Q9BY67 442 aaKnown RBP5.94□□□□□ -1.46
VPS52-219ENST00000493379 PRRG4Q9BZD6 226 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 LINC00470Q9BZP3 86 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 LRMDAQ9H2I8 198 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 LIME1Q9H400 295 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 MBNL3Q9NUK0 354 aaKnown RBP5.94□□□□□ -1.46
VPS52-219ENST00000493379 PARPBPQ9NWS1 579 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 TAS2R5Q9NYW4 299 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 SELENONQ9NZV5 590 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 EMC3Q9P0I2 261 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 MALT1Q9UDY8 824 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 ZNF229Q9UJW7 825 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 GPR52Q9Y2T5 361 aa5.94□□□□□ -1.46
VPS52-219ENST00000493379 PRKDCP78527 4128 aaKnown RBP5.93□□□□□ -1.46
VPS52-219ENST00000493379 WNK1Q9H4A3 2382 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 IGHV3-15A0A0B4J1V0 119 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 TCRBV3S1A0A5B6 114 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 NKX2-6A6NCS4 301 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 OR6C65A6NJZ3 312 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 CENPBD1B2RD01 187 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 TRAF3IP2O43734 574 aaPredicted RBP5.93□□□□□ -1.46
VPS52-219ENST00000493379 PTP4A3O75365 173 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 KRT36O76013 467 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 AKR7A3O95154 331 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 ZNF682O95780 498 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 RAC2P15153 192 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 PPP3CBP16298 524 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 TCN1P20061 433 aaPredicted RBP5.93□□□□□ -1.46
VPS52-219ENST00000493379 CCNA2P20248 432 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 COX5AP20674 150 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 EDNRAP25101 427 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 GRPRP30550 384 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 IFNA8P32881 189 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 SMIM11AP58511 58 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 TAS2R41P59536 307 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 RPS4XP62701 263 aaKnown RBP5.93□□□□□ -1.46
VPS52-219ENST00000493379 MXRA7P84157 204 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 FAM27E3Q08E93 113 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 TRAM2Q15035 370 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 STK11Q15831 433 aa5.93□□□□□ -1.46
VPS52-219ENST00000493379 PDLIM3Q53GG5 364 aaPredicted RBP5.93□□□□□ -1.46
VPS52-219ENST00000493379 OTUD3Q5T2D3 398 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms