RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 OR2T1O43869 369 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 IGLV1-44P01699 117 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 HLA-HP01893 362 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 NQO1P15559 274 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 CBR1P16152 277 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 FUT1P19526 365 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 AHCYP23526 432 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 GTF2E2P29084 291 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 PCGF2P35227 344 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 THBS4P35443 961 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 OR1E2P47887 323 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 IDH3GP51553 393 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 ARFIP2P53365 341 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 NUDT6P53370 316 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 UGT2B15P54855 530 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 BIDP55957 195 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 UBE2NP61088 152 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 GUCY1A3Q02108 690 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 POU3F1Q03052 451 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 RUNX1T1Q06455 604 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 RBBP4Q09028 425 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 PMS2P3Q13401 168 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 MELKQ14680 651 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 RAB35Q15286 201 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 ADIPOQQ15848 244 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 VMACQ2NL98 169 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 REP15Q6BDI9 236 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 ZNF544Q6NX49 715 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 LRFN4Q6PJG9 635 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 KLHL24Q6TFL4 600 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 CCDC80Q76M96 950 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 SLC46A3Q7Z3Q1 461 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 MEX3DQ86XN8 651 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 UEVLDQ8IX04 471 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 GPR137CQ8N3F9 429 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 PFN4Q8NHR9 129 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 MAGEE2Q8TD90 523 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 ADAMTS16Q8TE57 1224 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 TSPEARQ8WU66 669 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 STON2Q8WXE9 905 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 WDR89Q96FK6 387 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 ADAD1Q96M93 576 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 ZNF583Q96ND8 569 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 SORCS2Q96PQ0 1159 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 RHNO1Q9BSD3 238 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 RABEP2Q9H5N1 569 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 FKRPQ9H9S5 495 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 MEPEQ9NQ76 525 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 YAE1D1Q9NRH1 226 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 MRPL39Q9NYK5 338 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 ZNF224Q9NZL3 707 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 ARMCX1Q9P291 453 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 TESQ9UGI8 421 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 SLC13A4Q9UKG4 626 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 SLC7A7Q9UM01 511 aa6.33□□□□□ -1.4
PRPF4B-208ENST00000490653 IGHV2OR16-5A0A0B4J2B6 119 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 LYNX1G3V0Z9 82 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 MRASO14807 208 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 CHP2O43745 196 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 IGKV3-15P01624 115 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 VIMP08670 466 aaKnown RBP6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 OR4A8P0C604 315 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 ADORA3P0DMS8 318 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 LYNX1P0DP58 116 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 IFNGR1P15260 489 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 SERPINF1P36955 418 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 YAP1P46937 504 aaKnown RBP6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 NCALDP61601 193 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 MYBPC1Q00872 1141 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 ID3Q02535 119 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 PUDPQ08623 228 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 NPRL3Q12980 569 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 PIN1Q13526 163 aaPredicted RBP6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 MFSD13AQ14CX5 517 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 ZNF74Q16587 644 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 TRMT5Q32P41 509 aaKnown RBP6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 METTL21CQ5VZV1 264 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 ZNF613Q6PF04 617 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 TTC33Q6PID6 262 aaPredicted RBP6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 SSX8Q7RTT4 187 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 ABHD12BQ7Z5M8 362 aaPredicted RBP6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 RANBP3LQ86VV4 465 aaPredicted RBP6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 LRP11Q86VZ4 500 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 CARM1Q86X55 608 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 SNX32Q86XE0 403 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 SKA3Q8IX90 412 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 ARIH2OSQ8N7S6 290 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 ADPRHL1Q8NDY3 354 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 OR5J2Q8NH18 312 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 OR6S1Q8NH40 331 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 MOSPD2Q8NHP6 518 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 C10orf105Q8TEF2 133 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 C10orf82Q8WW14 230 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 TMEM54Q969K7 222 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 FOXN4Q96NZ1 517 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 DOK1Q99704 481 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 VRK1Q99986 396 aaPredicted RBP6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 TMEM43Q9BTV4 400 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 ASPNQ9BXN1 380 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 KRTAP4-5Q9BYR2 181 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms