RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ZNF519Q8TB69 540 aa5.89□□□□□ -1.47
PDLIM1-203ENST00000490391 GEMIN6Q8WXD5 167 aaKnown RBP5.89□□□□□ -1.47
PDLIM1-203ENST00000490391 RBMXL1Q96E39 390 aaKnown RBP5.89□□□□□ -1.47
PDLIM1-203ENST00000490391 CHMP6Q96FZ7 201 aa5.89□□□□□ -1.47
PDLIM1-203ENST00000490391 SIGLEC11Q96RL6 698 aa5.89□□□□□ -1.47
PDLIM1-203ENST00000490391 DCLRE1CQ96SD1 692 aaKnown RBP5.89□□□□□ -1.47
PDLIM1-203ENST00000490391 ZNF382Q96SR6 550 aa5.89□□□□□ -1.47
PDLIM1-203ENST00000490391 ACTRT3Q9BYD9 372 aa5.89□□□□□ -1.47
PDLIM1-203ENST00000490391 TMEM165Q9HC07 324 aa5.89□□□□□ -1.47
PDLIM1-203ENST00000490391 RPUSD1Q9UJJ7 312 aaKnown RBP5.89□□□□□ -1.47
PDLIM1-203ENST00000490391 SIGLEC9Q9Y336 463 aa5.89□□□□□ -1.47
PDLIM1-203ENST00000490391 CENPVL3A0A0U1RRI6 287 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 A8MT66 165 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 PGRMC1O00264 195 aaKnown RBP5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 AP3D1O14617 1153 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 SERPINA5P05154 406 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 WNT2P09544 360 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 SBK3P0C264 359 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 TACR3P29371 465 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 MSX2P35548 267 aaPredicted RBP5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 POLR2HP52434 150 aaKnown RBP5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 MAP2K6P52564 334 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 CLDN17P56750 224 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 FGF12P61328 243 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 BTG1P62324 171 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 RAB1AP62820 205 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 ID3Q02535 119 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 CLCQ05315 142 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 RAB39AQ14964 217 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 GPR68Q15743 365 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 TMEM225Q6GV28 225 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 NOXRED1Q6NXP6 359 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 KLC3Q6P597 504 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 RNF130Q86XS8 419 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 LRRC8AQ8IWT6 810 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 CTAGE3PQ8IX95 158 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 TMEM123Q8N131 208 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 MUC20Q8N307 709 aaPredicted RBP5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 KDM8Q8N371 416 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 ZNF283Q8N7M2 679 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 FGFBP3Q8TAT2 258 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 METTL6Q8TCB7 284 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 MGARPQ8TDB4 240 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 WDR89Q96FK6 387 aaPredicted RBP5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 KCNA7Q96RP8 456 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 SSBP3Q9BWW4 388 aaPredicted RBP5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 ZNF350Q9GZX5 532 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 IQCGQ9H095 443 aaKnown RBP5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 EXOSC3Q9NQT5 275 aaKnown RBP5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 TMEM106BQ9NUM4 274 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 ACOXLQ9NUZ1 547 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 B3GAT1Q9P2W7 334 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 VPREB3Q9UKI3 123 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 TMCO1Q9UM00 188 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 TIMM22Q9Y584 194 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 GPR45Q9Y5Y3 372 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 USH1CQ9Y6N9 552 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 PKHD1P08F94 4074 aa5.88□□□□□ -1.47
PDLIM1-203ENST00000490391 A0A0U1RQK1 487 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 CLDN24A6NM45 220 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 SPRY3O43610 288 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 SMIM24O75264 130 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 MFN2O95140 757 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 SNAP29O95721 258 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 RAB36O95755 333 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 CD55P08174 381 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 RBP1P09455 135 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 PATE4P0C8F1 98 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 CCL2P13500 99 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 MMP9P14780 707 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 B4GALT1P15291 398 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 HMOX2P30519 316 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 GABRA5P31644 462 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 LSP1P33241 339 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 RPL4P36578 427 aaKnown RBP5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 TGFBR2P37173 567 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 IDH2P48735 452 aaKnown RBP5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 PCBP3P57721 371 aaKnown RBP5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 ETF1P62495 437 aaKnown RBP5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 RBBP4Q09028 425 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 PMS2P3Q13401 168 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 TP53BP2Q13625 1128 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 KIAA0040Q15053 153 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 NSUN5P1Q3KNT7 163 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 UNC50Q53HI1 259 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 DMRTC1Q5HYR2 192 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 SPDYAQ5MJ70 313 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 MROH9Q5TGP6 573 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 ZNF813Q6ZN06 617 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 GPRIN3Q6ZVF9 776 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 GPR137CQ8N3F9 429 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 KLHDC1Q8N7A1 406 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 CPEB3Q8NE35 698 aaKnown RBP5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 OR5D16Q8NGK9 328 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 PSMA8Q8TAA3 256 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 PYROXD1Q8WU10 500 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 C10orf82Q8WW14 230 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 LRTOMTQ8WZ04 291 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 C11orf40Q8WZ69 217 aa5.87□□□□□ -1.47
PDLIM1-203ENST00000490391 R3HDM4Q96D70 268 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms