RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 M0R1B8 84 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 AP3D1O14617 1153 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 NPIPB7O75200 414 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 RBMXL2O75526 392 aaKnown RBP5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 CHRM4P08173 479 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 CSF3P09919 207 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 USF1P22415 310 aaPredicted RBP5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 IL12AP29459 219 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 SOAT1P35610 550 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 ACAA2P42765 397 aaKnown RBP5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 HTR3AP46098 478 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 POLR2HP52434 150 aaKnown RBP5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 OR2B6P58173 313 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 ABCE1P61221 599 aaKnown RBP5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 SLC35A1P78382 337 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 TXNL4AP83876 142 aaKnown RBP5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 EPS8Q12929 822 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 SYPL1Q16563 259 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 GSTA3Q16772 222 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 KRTAP24-1Q3LI83 254 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 SPANXN4Q5MJ08 99 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 TNFAIP8L2Q6P589 184 aaPredicted RBP5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 LRRC74BQ6ZQY2 392 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 ANKRD46Q86W74 232 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 NUDCD3Q8IVD9 361 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 TMEM99Q8N816 258 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 ZNF781Q8N8C0 355 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 ANKFN1Q8N957 763 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 VPS37AQ8NEZ2 397 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 ZNF563Q8TA94 476 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 HTRA1Q92743 480 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 RFKQ969G6 155 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 DNAJA3Q96EY1 480 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 ZNF385AQ96PM9 386 aaKnown RBP5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 SORT1Q99523 831 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 NAA11Q9BSU3 229 aaPredicted RBP5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 SF3B5Q9BWJ5 86 aaKnown RBP5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 DPY30Q9C005 99 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 FKRPQ9H9S5 495 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 CRNNQ9UBG3 495 aaPredicted RBP5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 LPAR3Q9UBY5 353 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 POU2F3Q9UKI9 436 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 SLC9A8Q9Y2E8 581 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 AMDHD2Q9Y303 409 aa5.52□□□□□ -1.53
PRPF40A-210ENST00000489741 IGHV1-18A0A0C4DH31 117 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 AQP7P3A6NL99 342 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 ATP6V1G2-DDX39BF2Z307 99 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 NDUFS8O00217 210 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 BIRC5O15392 142 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 LMX1BO60663 402 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 LY6HO94772 140 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 CPSF4O95639 269 aaKnown RBP5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 IGLV1-44P01699 117 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 SERPINE1P05121 402 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 GRPP07492 148 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 MYZAPP0CAP1 466 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 NDUFB7P17568 137 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 CCNA2P20248 432 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 PAX7P23759 505 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 IGFBP5P24593 272 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 LMO1P25800 156 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 TACR3P29371 465 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 NR4A2P43354 598 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 KHKP50053 298 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 RPL14P50914 215 aaKnown RBP5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 ZNF134P52741 427 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 MVDP53602 400 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 CLNS1AP54105 237 aaKnown RBP5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 LOXL3P58215 753 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 PRPS1P60891 318 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 VSNL1P62760 191 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 TGFBR3Q03167 851 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 CHRNB3Q05901 458 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 PDCD2Q16342 344 aaPredicted RBP5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 ZSWIM7Q19AV6 140 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 TNFAIP8L3Q5GJ75 292 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 C9orf135Q5VTT2 229 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 SFRP4Q6FHJ7 346 aaPredicted RBP5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 CASP12Q6UXS9 341 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 ZNF788Q6ZQV5 615 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 HMGN2P46Q86SG4 172 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 RNF130Q86XS8 419 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 ARIH2OSQ8N7S6 290 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 POMGNT2Q8NAT1 580 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 OR9K2Q8NGE7 335 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 MAGEE2Q8TD90 523 aaPredicted RBP5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 AENQ8WTP8 325 aaKnown RBP5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 BCL2L2Q92843 193 aaPredicted RBP5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 DDIT4LQ96D03 193 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 MSI2Q96DH6 328 aaKnown RBP5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 FOXN4Q96NZ1 517 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 MOGAT1Q96PD6 335 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 SLC35A5Q9BS91 424 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 BEX2Q9BXY8 128 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 PLK3Q9H4B4 646 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 MEAF6Q9HAF1 191 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 OBP2BQ9NPH6 170 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 UPB1Q9UBR1 384 aa5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 MARCOQ9UEW3 520 aaPredicted RBP5.51□□□□□ -1.53
PRPF40A-210ENST00000489741 MOKQ9UQ07 419 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms