RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 OXGR1Q96P68 337 aa2.09□□□□□ -2.07
RFC4-213ENST00000489028 KCNA7Q96RP8 456 aa2.09□□□□□ -2.07
RFC4-213ENST00000489028 TGS1Q96RS0 853 aaKnown RBP2.09□□□□□ -2.07
RFC4-213ENST00000489028 MRPL45Q9BRJ2 306 aaKnown RBP2.09□□□□□ -2.07
RFC4-213ENST00000489028 RTBDNQ9BSG5 229 aaPredicted RBP2.09□□□□□ -2.07
RFC4-213ENST00000489028 C20orf24Q9BUV8 137 aa2.09□□□□□ -2.07
RFC4-213ENST00000489028 ACTR6Q9GZN1 396 aa2.09□□□□□ -2.07
RFC4-213ENST00000489028 IQCGQ9H095 443 aaKnown RBP2.09□□□□□ -2.07
RFC4-213ENST00000489028 GBA3Q9H227 469 aa2.09□□□□□ -2.07
RFC4-213ENST00000489028 MRPL47Q9HD33 250 aaKnown RBP2.09□□□□□ -2.07
RFC4-213ENST00000489028 GLRX2Q9NS18 164 aa2.09□□□□□ -2.07
RFC4-213ENST00000489028 DDX18Q9NVP1 670 aaKnown RBP2.09□□□□□ -2.07
RFC4-213ENST00000489028 GIN1Q9NXP7 522 aa2.09□□□□□ -2.07
RFC4-213ENST00000489028 KCNIP1Q9NZI2 227 aa2.09□□□□□ -2.07
RFC4-213ENST00000489028 GCNT4Q9P109 453 aa2.09□□□□□ -2.07
RFC4-213ENST00000489028 PITPNC1Q9UKF7 332 aa2.09□□□□□ -2.07
RFC4-213ENST00000489028 WDR19Q8NEZ3 1342 aa2.09□□□□□ -2.08
RFC4-213ENST00000489028 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.08□□□□□ -2.08
RFC4-213ENST00000489028 NCF1BA6NI72 391 aaPredicted RBP2.08□□□□□ -2.08
RFC4-213ENST00000489028 OR2AG2A6NM03 316 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 NCF1CA8MVU1 366 aaPredicted RBP2.08□□□□□ -2.08
RFC4-213ENST00000489028 L7N2F9 121 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 CLOCKO15516 846 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 FAM189A1O60320 539 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 KLF8O95600 359 aaPredicted RBP2.08□□□□□ -2.08
RFC4-213ENST00000489028 UBTFL1P0CB47 393 aaPredicted RBP2.08□□□□□ -2.08
RFC4-213ENST00000489028 NPR2P20594 1047 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 ATP6V1B2P21281 511 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 SLC2A5P22732 501 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 GLP1RP43220 463 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 RFX3P48380 749 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 GSSP48637 474 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 ARRB1P49407 418 aaPredicted RBP2.08□□□□□ -2.08
RFC4-213ENST00000489028 RAB9AP51151 201 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 CCR6P51684 374 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 MRPS22P82650 360 aaKnown RBP2.08□□□□□ -2.08
RFC4-213ENST00000489028 EIF4EBP1Q13541 118 aaPredicted RBP2.08□□□□□ -2.08
RFC4-213ENST00000489028 ARFRP1Q13795 201 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 WDR43Q15061 677 aaKnown RBP eCLIP2.08□□□□□ -2.08
RFC4-213ENST00000489028 CHRNA6Q15825 494 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 CASC10Q5T4H9 136 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 C1orf146Q5VVC0 180 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 C19orf35Q6ZS72 473 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 SLC25A48Q6ZT89 311 aaKnown RBP2.08□□□□□ -2.08
RFC4-213ENST00000489028 SSX9Q7RTT3 188 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 SLC26A11Q86WA9 606 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 ZNF561Q8N587 486 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 FAM184AQ8NB25 1140 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 OR10G3Q8NGC4 313 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 OR51S1Q8NGJ8 323 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 CHCHD10Q8WYQ3 142 aaPredicted RBP2.08□□□□□ -2.08
RFC4-213ENST00000489028 STARD8Q92502 1023 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 CMTM7Q96FZ5 175 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 GSDMAQ96QA5 445 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 OR8B4Q96RC9 309 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 SORT1Q99523 831 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 SH3GL1Q99961 368 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 P2RY13Q9BPV8 354 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 KCTD14Q9BQ13 255 aaPredicted RBP2.08□□□□□ -2.08
RFC4-213ENST00000489028 POLR2J2Q9GZM3 115 aaKnown RBP2.08□□□□□ -2.08
RFC4-213ENST00000489028 POLR2J3Q9H1A7 115 aaKnown RBP2.08□□□□□ -2.08
RFC4-213ENST00000489028 VCXQ9H320 206 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 RANBP3Q9H6Z4 567 aaPredicted RBP2.08□□□□□ -2.08
RFC4-213ENST00000489028 AUNIPQ9H7T9 357 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 GEMIN7Q9H840 131 aaKnown RBP2.08□□□□□ -2.08
RFC4-213ENST00000489028 PLGRKTQ9HBL7 147 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 CRLF2Q9HC73 371 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 IL26Q9NPH9 171 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 HOXC10Q9NYD6 342 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 MTRF1LQ9UGC7 380 aaKnown RBP2.08□□□□□ -2.08
RFC4-213ENST00000489028 TRAF3IP3Q9Y228 551 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 TTC41PQ6P2S7 1318 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 USP47Q96K76 1375 aa2.08□□□□□ -2.08
RFC4-213ENST00000489028 NSG1A0A0A6YYJ2 146 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 A6NIZ1 184 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 LRRIQ3A6PVS8 624 aaPredicted RBP2.07□□□□□ -2.08
RFC4-213ENST00000489028 SPECC1L-ADORA2AF8WAN1 911 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 TMX2-CTNND1H3BSU7 103 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 CCL21O00585 134 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 DLGAP1O14490 977 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 GOSR2O14653 212 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 AIM2O14862 343 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 DNAJB6O75190 326 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 CTAG2O75638 210 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 OR2J3O76001 311 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 C1orf105O95561 183 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 MOSP00540 346 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 STAG3L3P0CL85 134 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 RALBP11234 206 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 ZNF43P17038 809 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 TCN1P20061 433 aaPredicted RBP2.07□□□□□ -2.08
RFC4-213ENST00000489028 COX7A1P24310 79 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 FOXN2P32314 431 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 ATP5C1P36542 298 aaKnown RBP2.07□□□□□ -2.08
RFC4-213ENST00000489028 CCT6AP40227 531 aaKnown RBP2.07□□□□□ -2.08
RFC4-213ENST00000489028 KLK7P49862 253 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 FBXW4P57775 412 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 RAB10P61026 200 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 RAP1BP61224 184 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 C9orf135Q5VTT2 229 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms