RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 DGCR6LQ9BY27 220 aa2.79□□□□□ -1.96
PRPF4-203ENST00000488937 HOXD1Q9GZZ0 328 aa2.79□□□□□ -1.96
PRPF4-203ENST00000488937 UPF3AQ9H1J1 476 aaKnown RBP2.79□□□□□ -1.96
PRPF4-203ENST00000488937 NXF3Q9H4D5 531 aaKnown RBP2.79□□□□□ -1.96
PRPF4-203ENST00000488937 MRM3Q9HC36 420 aaKnown RBP2.79□□□□□ -1.96
PRPF4-203ENST00000488937 SIX2Q9NPC8 291 aa2.79□□□□□ -1.96
PRPF4-203ENST00000488937 ACP6Q9NPH0 428 aa2.79□□□□□ -1.96
PRPF4-203ENST00000488937 IL1RAPQ9NPH3 570 aa2.79□□□□□ -1.96
PRPF4-203ENST00000488937 CLN6Q9NWW5 311 aa2.79□□□□□ -1.96
PRPF4-203ENST00000488937 HRASLS2Q9NWW9 162 aa2.79□□□□□ -1.96
PRPF4-203ENST00000488937 TAS2R16Q9NYV7 291 aa2.79□□□□□ -1.96
PRPF4-203ENST00000488937 CCDC59Q9P031 241 aaKnown RBP2.79□□□□□ -1.96
PRPF4-203ENST00000488937 SEC14L4Q9UDX3 406 aa2.79□□□□□ -1.96
PRPF4-203ENST00000488937 WARS2Q9UGM6 360 aaKnown RBP2.79□□□□□ -1.96
PRPF4-203ENST00000488937 LGALS13Q9UHV8 139 aa2.79□□□□□ -1.96
PRPF4-203ENST00000488937 TMCO1Q9UM00 188 aa2.79□□□□□ -1.96
PRPF4-203ENST00000488937 COPS3Q9UNS2 423 aa2.79□□□□□ -1.96
PRPF4-203ENST00000488937 SAMD4AQ9UPU9 718 aaKnown RBP2.79□□□□□ -1.96
PRPF4-203ENST00000488937 PRELID1Q9Y255 219 aa2.79□□□□□ -1.96
PRPF4-203ENST00000488937 AUP1Q9Y679 476 aa2.79□□□□□ -1.96
PRPF4-203ENST00000488937 PLEKHH1Q9ULM0 1364 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 GOLGA8IPA6NC78 632 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 K7ERI5 159 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 CCL21O00585 134 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 AQP9O43315 295 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 SOX15O60248 233 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 TOM1O60784 492 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 NXPH4O95158 308 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 LDOC1O95751 146 aaPredicted RBP2.78□□□□□ -1.96
PRPF4-203ENST00000488937 IGHG1P01857 330 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 RETP07949 1114 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 PSG1P11464 419 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 DAOP14920 347 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 PSMC3P17980 439 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 OR1E1P30953 314 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 EPHX2P34913 555 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 PCYT1AP49585 367 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 ACTBP60709 375 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 ACTA2P62736 377 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 ACTG1P63261 375 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 ACTG2P63267 376 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 ACTC1P68032 377 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 ACTA1P68133 377 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 VLDLRP98155 873 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 PITPNAQ00169 270 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 CALCOCO2Q13137 446 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 MED21Q13503 144 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 GPNMBQ14956 572 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 MAD2L1BPQ15013 274 aaPredicted RBP2.78□□□□□ -1.96
PRPF4-203ENST00000488937 NECTIN1Q15223 517 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 PSG5Q15238 335 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 ATP6V1FQ16864 119 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 C5orf64Q2M2E5 130 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 GPRC6AQ5T6X5 926 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 ZNF57Q68EA5 555 aaPredicted RBP2.78□□□□□ -1.96
PRPF4-203ENST00000488937 FRRS1Q6ZNA5 592 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 C9orf47Q6ZRZ4 202 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 CMC1Q7Z7K0 106 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 CARM1Q86X55 608 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 CRLF3Q8IUI8 442 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 LACC1Q8IV20 430 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 CCDC71Q8IV32 467 aaPredicted RBP2.78□□□□□ -1.96
PRPF4-203ENST00000488937 PIANPQ8IYJ0 282 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 ZBED8Q8IZ13 594 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 ABHD12Q8N2K0 398 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 LIX1Q8N485 282 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 TMEM156Q8N614 296 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 ZNF738Q8NE65 137 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 OR5T1Q8NG75 326 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 OR51F2Q8NH61 342 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 ITFG1Q8TB96 612 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 TCTEX1D2Q8WW35 142 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 OR8D1Q8WZ84 308 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 RAB3CQ96E17 227 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 ADGRG7Q96K78 797 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 ZNF75AQ96N20 296 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 MS4A4EQ96PG1 132 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 OR8B4Q96RC9 309 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 CYP2S1Q96SQ9 504 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 TIMM29Q9BSF4 260 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 TRIM51Q9BSJ1 452 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 CABLES2Q9BTV7 478 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 RBKSQ9H477 322 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 PLEKHA1Q9HB21 404 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 VCX3AQ9NNX9 186 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 SIRT7Q9NRC8 400 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 THUMPD1Q9NXG2 353 aaKnown RBP2.78□□□□□ -1.96
PRPF4-203ENST00000488937 SLC39A1Q9NY26 324 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 MLXQ9UH92 298 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 CYB5R1Q9UHQ9 305 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 RIMS3Q9UJD0 308 aa2.78□□□□□ -1.96
PRPF4-203ENST00000488937 RPL36Q9Y3U8 105 aaKnown RBP2.78□□□□□ -1.96
PRPF4-203ENST00000488937 USP6P35125 1406 aa2.77□□□□□ -1.97
PRPF4-203ENST00000488937 PHF3Q92576 2039 aaKnown RBP2.77□□□□□ -1.97
PRPF4-203ENST00000488937 LOC100131303A0A0U1RQF7 123 aa2.77□□□□□ -1.97
PRPF4-203ENST00000488937 IQCMA0A1B0GVH7 501 aa2.77□□□□□ -1.97
PRPF4-203ENST00000488937 A0A1B0GWB2 263 aa2.77□□□□□ -1.97
PRPF4-203ENST00000488937 TSPAN11A1L157 253 aa2.77□□□□□ -1.97
PRPF4-203ENST00000488937 BCLAF3A2AJT9 711 aaKnown RBP2.77□□□□□ -1.97
PRPF4-203ENST00000488937 CENPBD1B2RD01 187 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 210.6 ms