RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 CCDC42Q96M95 316 aa2.6□□□□□ -1.99
SSR1-209ENST00000488834 RIT2Q99578 217 aa2.6□□□□□ -1.99
SSR1-209ENST00000488834 CIB1Q99828 191 aa2.6□□□□□ -1.99
SSR1-209ENST00000488834 SPZ1Q9BXG8 430 aa2.6□□□□□ -1.99
SSR1-209ENST00000488834 NAT10Q9H0A0 1025 aaKnown RBP2.6□□□□□ -1.99
SSR1-209ENST00000488834 BLZF1Q9H2G9 400 aa2.6□□□□□ -1.99
SSR1-209ENST00000488834 RGCCQ9H4X1 137 aa2.6□□□□□ -1.99
SSR1-209ENST00000488834 GEMIN7Q9H840 131 aaKnown RBP2.6□□□□□ -1.99
SSR1-209ENST00000488834 ANKRA2Q9H9E1 313 aa2.6□□□□□ -1.99
SSR1-209ENST00000488834 SPACA1Q9HBV2 294 aa2.6□□□□□ -1.99
SSR1-209ENST00000488834 UFSP2Q9NUQ7 469 aa2.6□□□□□ -1.99
SSR1-209ENST00000488834 FAIMQ9NVQ4 179 aa2.6□□□□□ -1.99
SSR1-209ENST00000488834 RMND1Q9NWS8 449 aa2.6□□□□□ -1.99
SSR1-209ENST00000488834 MRPL22Q9NWU5 206 aaKnown RBP2.6□□□□□ -1.99
SSR1-209ENST00000488834 KLK12Q9UKR0 248 aa2.6□□□□□ -1.99
SSR1-209ENST00000488834 FAM32AQ9Y421 112 aaKnown RBP2.6□□□□□ -1.99
SSR1-209ENST00000488834 USP16Q9Y5T5 823 aa2.6□□□□□ -1.99
SSR1-209ENST00000488834 CDH10Q9Y6N8 788 aa2.6□□□□□ -1.99
SSR1-209ENST00000488834 FRMPD4Q14CM0 1322 aa2.6□□□□□ -1.99
SSR1-209ENST00000488834 TONSLQ96HA7 1378 aa2.6□□□□□ -1.99
SSR1-209ENST00000488834 HFM1A2PYH4 1435 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 BLMP54132 1417 aaPredicted RBP2.59□□□□□ -1.99
SSR1-209ENST00000488834 TCOF1Q13428 1488 aaKnown RBP2.59□□□□□ -1.99
SSR1-209ENST00000488834 FYCO1Q9BQS8 1478 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 CASZ1Q86V15 1759 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 CLASP1Q7Z460 1538 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 TRAV6A0A075B6T7 132 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 TRAV25A0A0B4J276 109 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 IGHV2-70DA0A0C4DH43 119 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 A0A1B0GVL5 298 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 A0A1W2PNV4 684 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 ESYT2A0FGR8 921 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 SNTNA6NMZ2 147 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 NPIPA7E9PJI5 369 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 ZNF701M0R085 212 aaPredicted RBP2.59□□□□□ -1.99
SSR1-209ENST00000488834 TRDMT1O14717 391 aaKnown RBP2.59□□□□□ -1.99
SSR1-209ENST00000488834 ZW10O43264 779 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 SULT1B1O43704 296 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 TIMM8AO60220 97 aaPredicted RBP2.59□□□□□ -1.99
SSR1-209ENST00000488834 CLPXO76031 633 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 TGM6O95932 706 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 LALBAP00709 142 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 H2BFMP0C1H6 154 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 STAG3L2P0CL84 134 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 NPIPA8P0DM63 369 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 HPGDP15428 266 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 NCK1P16333 377 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 SRMP19623 302 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 EIF2S2P20042 333 aaKnown RBP2.59□□□□□ -1.99
SSR1-209ENST00000488834 CBX5P45973 191 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 NUP107P57740 925 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 ELF3P78545 371 aaPredicted RBP2.59□□□□□ -1.99
SSR1-209ENST00000488834 LRRC63Q05C16 580 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 GNA13Q14344 377 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 MESDQ14696 234 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 CASP8Q14790 479 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 NSDHLQ15738 373 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 CHRNA6Q15825 494 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 FAM83EQ2M2I3 478 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 TRIM16LQ309B1 348 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 XKR7Q5GH72 579 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 PAGE3Q5JUK9 113 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 RAET1LQ5VY80 246 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 PLCXD3Q63HM9 321 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 OR52E8Q6IFG1 317 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 FAM173BQ6P4H8 233 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 RNASEKQ6P5S7 137 aaKnown RBP2.59□□□□□ -1.99
SSR1-209ENST00000488834 IL34Q6ZMJ4 242 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 VTCN1Q7Z7D3 282 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 C17orf82Q86X59 251 aaPredicted RBP2.59□□□□□ -1.99
SSR1-209ENST00000488834 VRK2Q86Y07 508 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 OR7G1Q8NGA0 311 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 OR52I1Q8NGK6 324 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 ANGPTL6Q8NI99 470 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 ZNF596Q8TC21 504 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 LKAAEAR1Q8TD35 194 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 ASZ1Q8WWH4 475 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 OR1E3Q8WZA6 343 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 SH3YL1Q96HL8 342 aaPredicted RBP2.59□□□□□ -1.99
SSR1-209ENST00000488834 CELF6Q96J87 481 aaKnown RBP2.59□□□□□ -1.99
SSR1-209ENST00000488834 C7orf34Q96L11 122 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 MCHR1Q99705 422 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 NRTNQ99748 197 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 OMDQ99983 421 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 LLPHQ9BRT6 129 aaKnown RBP2.59□□□□□ -1.99
SSR1-209ENST00000488834 SRXN1Q9BYN0 137 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 SLC25A39Q9BZJ4 359 aaPredicted RBP2.59□□□□□ -1.99
SSR1-209ENST00000488834 VCXQ9H320 206 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 CENPHQ9H3R5 247 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 C8orf33Q9H7E9 229 aaPredicted RBP2.59□□□□□ -1.99
SSR1-209ENST00000488834 TREM1Q9NP99 234 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 SMOXQ9NWM0 555 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 SLC2A8Q9NY64 477 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 AHSPQ9NZD4 102 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 PIPOXQ9P0Z9 390 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 WRAP73Q9P2S5 460 aaPredicted RBP2.59□□□□□ -1.99
SSR1-209ENST00000488834 MTRF1LQ9UGC7 380 aaKnown RBP2.59□□□□□ -1.99
SSR1-209ENST00000488834 HMGXB4Q9UGU5 601 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 VANGL2Q9ULK5 521 aa2.59□□□□□ -1.99
SSR1-209ENST00000488834 TBC1D24Q9ULP9 559 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms