RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 KIR3DP1A8MWS1 328 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 MS4A18H0YCH9 400 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 AIREO43918 545 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 NEURL1O76050 574 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 TCEA1P23193 301 aaKnown RBP11.4□□□□□ -0.59
NELFE-209ENST00000488426 DAP3P51398 398 aaKnown RBP11.4□□□□□ -0.59
NELFE-209ENST00000488426 ACSM1Q08AH1 577 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 KLRB1Q12918 225 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 GALEQ14376 348 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 ZNF239Q16600 458 aaKnown RBP11.4□□□□□ -0.59
NELFE-209ENST00000488426 MS4A18Q3C1V0 323 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 RAET1LQ5VY80 246 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 FAM205BPQ63HN1 556 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 TMPRSS11AQ6ZMR5 421 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 GALNT16Q8N428 558 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 TMEM99Q8N816 258 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 TEX19Q8NA77 164 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 OR5M1Q8NGP8 315 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 OR2T4Q8NH00 348 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 ZPLD1Q8TCW7 415 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 SMPDL3BQ92485 455 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 OR5B2Q96R09 309 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 FAM173AQ9BQD7 235 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 MFRPQ9BY79 579 aa11.4□□□□□ -0.59
NELFE-209ENST00000488426 RPRD1BQ9NQG5 326 aaKnown RBP11.4□□□□□ -0.59
NELFE-209ENST00000488426 USP9XQ93008 2570 aaPredicted RBP11.39□□□□□ -0.59
NELFE-209ENST00000488426 LRRK2Q5S007 2527 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 OR2M5A3KFT3 312 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 A6NIZ1 184 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 SEC14L5O43304 696 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 PMS2P2O95744 297 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 OR2T7P0C7T2 308 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 CPEP16870 476 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 GADD45AP24522 165 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 ACVR1BP36896 505 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 CAPZA2P47755 286 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 RAP1BP61224 184 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 RAP1AP62834 184 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 FOXK1P85037 733 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 AQP6Q13520 282 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 DOC2BQ14184 412 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 SSX1Q16384 188 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 OR2G6Q5TZ20 316 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 ZNF322Q6U7Q0 402 aaPredicted RBP11.39□□□□□ -0.59
NELFE-209ENST00000488426 PXKQ7Z7A4 578 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 ATCAYQ86WG3 371 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 OR10H4Q8NGA5 316 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 OR2T27Q8NH04 317 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 MIB2Q96AX9 1013 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 ZMYND19Q96E35 227 aaPredicted RBP11.39□□□□□ -0.59
NELFE-209ENST00000488426 C5orf34Q96MH7 638 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 DCUN1D5Q9BTE7 237 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 ALG8Q9BVK2 526 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 ZFP64Q9NPA5 681 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 DEPPQ9NTK1 212 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 NDUFB11Q9NX14 153 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 RPH3AQ9Y2J0 694 aaPredicted RBP11.39□□□□□ -0.59
NELFE-209ENST00000488426 PCDHGA9Q9Y5G4 932 aaKnown RBP11.39□□□□□ -0.59
NELFE-209ENST00000488426 NOX1Q9Y5S8 564 aa11.39□□□□□ -0.59
NELFE-209ENST00000488426 UTP20O75691 2785 aaKnown RBP11.39□□□□□ -0.59
NELFE-209ENST00000488426 PTPN13Q12923 2485 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 PRSS37A4D1T9 235 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 GJE1A6NN92 205 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 ARHGEF9O43307 516 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 AKAP8O43823 692 aaKnown RBP11.38□□□□□ -0.59
NELFE-209ENST00000488426 PLGP00747 810 aaPredicted RBP11.38□□□□□ -0.59
NELFE-209ENST00000488426 MRPL3P09001 348 aaKnown RBP11.38□□□□□ -0.59
NELFE-209ENST00000488426 NR4A1P22736 598 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 OR2B6P58173 313 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 SLC35A1P78382 337 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 BDH1Q02338 343 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 CBX3Q13185 183 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 TPBGQ13641 420 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 SPCS2Q15005 226 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 OR1C1Q15619 314 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 TMEM176BQ3YBM2 270 aaPredicted RBP11.38□□□□□ -0.59
NELFE-209ENST00000488426 PRR30Q53SZ7 412 aaPredicted RBP11.38□□□□□ -0.59
NELFE-209ENST00000488426 LINC01590Q5TEZ4 76 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 AGAP7PQ5VUJ5 663 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 SPINK14Q6IE38 97 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 RBMXL3Q8N7X1 1067 aaKnown RBP11.38□□□□□ -0.59
NELFE-209ENST00000488426 Q8NA96 180 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 OR6K6Q8NGW6 343 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 AGAP4Q96P64 663 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 SIGLEC12Q96PQ1 595 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 ALG12Q9BV10 488 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 RNF32Q9H0A6 362 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 TMEM185BQ9H7F4 350 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 VSX1Q9NZR4 365 aaPredicted RBP11.38□□□□□ -0.59
NELFE-209ENST00000488426 ITGB1BP2Q9UKP3 347 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 FKBP7Q9Y680 259 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 SHANK1Q9Y566 2161 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 CYSRT1A8MQ03 144 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 NPIPA5E9PKD4 350 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 TPD52L2O43399 206 aaKnown RBP11.38□□□□□ -0.59
NELFE-209ENST00000488426 AKR7A3O95154 331 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 WDPCPO95876 746 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 BCL10O95999 233 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 SHC1P29353 583 aa11.38□□□□□ -0.59
NELFE-209ENST00000488426 SFTPDP35247 375 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms