RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 CDK6Q00534 326 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 EGR4Q05215 589 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 DMTNQ08495 405 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 LRRC74AQ0VAA2 488 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 TNK1Q13470 666 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 SCARB2Q14108 478 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 GNA13Q14344 377 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 SQLEQ14534 574 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 SLC17A1Q14916 467 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 LARS2Q15031 903 aaKnown RBP5.16□□□□□ -1.58
CDHR3-213ENST00000488386 P2RY6Q15077 328 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 GABRA6Q16445 453 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 ZNF672Q499Z4 452 aaPredicted RBP5.16□□□□□ -1.58
CDHR3-213ENST00000488386 HIKESHIQ53FT3 197 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 LRIF1Q5T3J3 769 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 RNF220Q5VTB9 566 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 C1orf140Q5VVS0 124 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 SHEQ5VZ18 495 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 AP1ARQ63HQ0 302 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 WBP2NLQ6ICG8 309 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 NIPAL3Q6P499 406 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 MSANTD1Q6ZTZ1 278 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 AAED1Q7RTV5 226 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 WDFY1Q8IWB7 410 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 LRRC75A-AS1Q8N1F1 130 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 FITM2Q8N6M3 262 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 ZNF611Q8N823 705 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 CPEB3Q8NE35 698 aaKnown RBP5.16□□□□□ -1.58
CDHR3-213ENST00000488386 IL17RDQ8NFM7 739 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 OR9K2Q8NGE7 335 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 BBS10Q8TAM1 723 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 PPP1R35Q8TAP8 253 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 SMAP2Q8WU79 429 aaPredicted RBP5.16□□□□□ -1.58
CDHR3-213ENST00000488386 CKAP2Q8WWK9 683 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 HSD17B8Q92506 261 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 PIP5K1AQ99755 562 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 NAA11Q9BSU3 229 aaPredicted RBP5.16□□□□□ -1.58
CDHR3-213ENST00000488386 CCDC28BQ9BUN5 200 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 PTDSS2Q9BVG9 487 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 TAPBPLQ9BX59 468 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 HDHD5Q9BXW7 423 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 TRIM2Q9C040 744 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 ESRP2Q9H6T0 727 aaKnown RBP5.16□□□□□ -1.58
CDHR3-213ENST00000488386 A4GALTQ9NPC4 353 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 FANCFQ9NPI8 374 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 CISD1Q9NZ45 108 aaKnown RBP5.16□□□□□ -1.58
CDHR3-213ENST00000488386 CALML5Q9NZT1 146 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 EMC3Q9P0I2 261 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 UPB1Q9UBR1 384 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 USP22Q9UPT9 525 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 SLC25A15Q9Y619 301 aa5.16□□□□□ -1.58
CDHR3-213ENST00000488386 IGKV1D-42A0A075B6H8 117 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 A0A1B0GWA3 101 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 TMEM247A6NEH6 219 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 AQP7P3A6NL99 342 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 A8MVM7 634 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 INAFM1C9JVW0 142 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 FTCDNL1E5RQL4 147 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 E7EQL1 145 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 ATP6V1G2-DDX39BF2Z307 99 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 PDLIM1O00151 329 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 FAAHO00519 579 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 ARHGEF9O43307 516 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 EDF1O60869 148 aaKnown RBP5.15□□□□□ -1.59
CDHR3-213ENST00000488386 FZD7O75084 574 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 SERPINI2O75830 405 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 LY6HO94772 140 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 AHSA1O95433 338 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 IGHV4-39P01824 125 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 SLPIP03973 132 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 GPIP06744 558 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 PNMTP11086 282 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 HLA-DOBP13765 273 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 UQCRBP14927 111 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 H2AFXP16104 143 aaPredicted RBP5.15□□□□□ -1.59
CDHR3-213ENST00000488386 HTR3AP46098 478 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 CLDN17P56750 224 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 IL1RL1Q01638 556 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 VEZF1Q14119 521 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 PDK3Q15120 406 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 CLEC12BQ2HXU8 276 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 RUNDC3AQ59EK9 446 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 TIMM23BQ5SRD1 257 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 PHYHD1Q5SRE7 291 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 PRAMEF8Q5VWM4 474 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 PRAMEF7Q5VXH5 474 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 CARD17Q5XLA6 110 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 TMEM225Q6GV28 225 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 CGB2Q6NT52 195 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 SLC22A25Q6T423 547 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 PAQR6Q6TCH4 344 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 DLEU7Q6UYE1 221 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 DHDDSQ86SQ9 333 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 BIVMQ86UB2 503 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 MYPOPQ86VE0 399 aaPredicted RBP5.15□□□□□ -1.59
CDHR3-213ENST00000488386 PTOV1Q86YD1 416 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 FAM90A1Q86YD7 464 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 RBM45Q8IUH3 476 aaKnown RBP5.15□□□□□ -1.59
CDHR3-213ENST00000488386 EPHX4Q8IUS5 362 aa5.15□□□□□ -1.59
CDHR3-213ENST00000488386 OR4D11Q8NGI4 311 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms