RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 TRIP10Q15642 601 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 WDR88Q6ZMY6 472 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 LRP11Q86VZ4 500 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 C11orf65Q8NCR3 313 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 OR6X1Q8NH79 312 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 TMEM54Q969K7 222 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 ARHGDIGQ99819 225 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 FOXB1Q99853 325 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 TAS2R5Q9NYW4 299 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 GLTPQ9NZD2 209 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 ZNF224Q9NZL3 707 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 FBXL3Q9UKT7 428 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 ANGPT4Q9Y264 503 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 ARFGEF3Q5TH69 2177 aa13.18□□□□□ -0.3
TRIM50-203ENST00000488217 HMGB1P1B2RPK0 211 aaPredicted RBP13.17□□□□□ -0.3
TRIM50-203ENST00000488217 C11orf98E9PRG8 122 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 M0R233 179 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 UBL3O95164 117 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 CH25HO95992 272 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 PATE4P0C8F1 98 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 SRP14P37108 136 aaKnown RBP13.17□□□□□ -0.3
TRIM50-203ENST00000488217 SEC24CP53992 1094 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 CDH15P55291 814 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 TMEM33P57088 247 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 PCBP3P57721 371 aaKnown RBP13.17□□□□□ -0.3
TRIM50-203ENST00000488217 RBBP4Q09028 425 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 RAB39AQ14964 217 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 FXNQ16595 210 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 ENTPD8Q5MY95 495 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 ELFN2Q5R3F8 820 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 TTC33Q6PID6 262 aaPredicted RBP13.17□□□□□ -0.3
TRIM50-203ENST00000488217 LRFN4Q6PJG9 635 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 SLC35D2Q76EJ3 337 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 PTOV1Q86YD1 416 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 RFLNBQ8N5W9 214 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 OR6T1Q8NGN1 323 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 FGFBP3Q8TAT2 258 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 RDH5Q92781 318 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 SYT3Q9BQG1 590 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 CPPED1Q9BRF8 314 aaPredicted RBP13.17□□□□□ -0.3
TRIM50-203ENST00000488217 DUSP13Q9UII6 198 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 NDUFAF1Q9Y375 327 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 ANK2Q01484 3957 aa13.17□□□□□ -0.3
TRIM50-203ENST00000488217 YLPM1P49750 1951 aaKnown RBP13.16□□□□□ -0.3
TRIM50-203ENST00000488217 B4DSR2 109 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 M0R3H8 397 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 CHP2O43745 196 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 HPXP02790 462 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 HIST1H2ABP04908 130 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 OR8G3PP0DMU2 310 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 LSP1P33241 339 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 ALDH3B1P43353 468 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 DVL1P1P54792 670 aaPredicted RBP13.16□□□□□ -0.3
TRIM50-203ENST00000488217 RPS23P62266 143 aaKnown RBP13.16□□□□□ -0.3
TRIM50-203ENST00000488217 ZNF74Q16587 644 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 HIST3H2AQ7L7L0 130 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 RBM45Q8IUH3 476 aaKnown RBP13.16□□□□□ -0.3
TRIM50-203ENST00000488217 SLC22A24Q8N4F4 322 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 DPP10Q8N608 796 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 LRRC17Q8N6Y2 441 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 GPR32P1Q8NGA4 272 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 HIST1H2ACQ93077 130 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 ZNF566Q969W8 418 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 SLC25A44Q96H78 314 aaPredicted RBP13.16□□□□□ -0.3
TRIM50-203ENST00000488217 NANSQ9NR45 359 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 LEF1Q9UJU2 399 aaPredicted RBP13.16□□□□□ -0.3
TRIM50-203ENST00000488217 FZR1Q9UM11 496 aa13.16□□□□□ -0.3
TRIM50-203ENST00000488217 CPSF4LA6NMK7 179 aaKnown RBP13.15□□□□□ -0.3
TRIM50-203ENST00000488217 RNF13O43567 381 aa13.15□□□□□ -0.3
TRIM50-203ENST00000488217 TCF21O43680 179 aa13.15□□□□□ -0.3
TRIM50-203ENST00000488217 ENTPD5O75356 428 aa13.15□□□□□ -0.3
TRIM50-203ENST00000488217 LYPD3O95274 346 aa13.15□□□□□ -0.3
TRIM50-203ENST00000488217 THY1P04216 161 aa13.15□□□□□ -0.3
TRIM50-203ENST00000488217 PCMT1P22061 227 aa13.15□□□□□ -0.3
TRIM50-203ENST00000488217 CCNIQ14094 377 aa13.15□□□□□ -0.3
TRIM50-203ENST00000488217 NPTX1Q15818 432 aa13.15□□□□□ -0.3
TRIM50-203ENST00000488217 CYP51A1Q16850 503 aa13.15□□□□□ -0.3
TRIM50-203ENST00000488217 REP15Q6BDI9 236 aa13.15□□□□□ -0.3
TRIM50-203ENST00000488217 CARM1Q86X55 608 aa13.15□□□□□ -0.3
TRIM50-203ENST00000488217 ZNF584Q8IVC4 421 aa13.15□□□□□ -0.3
TRIM50-203ENST00000488217 ADAMTS16Q8TE57 1224 aa13.15□□□□□ -0.3
TRIM50-203ENST00000488217 SLC7A8Q9UHI5 535 aa13.15□□□□□ -0.3
TRIM50-203ENST00000488217 SLC22A23A1A5C7 686 aa13.14□□□□□ -0.31
TRIM50-203ENST00000488217 TRAPPC13A5PLN9 417 aa13.14□□□□□ -0.31
TRIM50-203ENST00000488217 DHHO43323 396 aa13.14□□□□□ -0.31
TRIM50-203ENST00000488217 BCL10O95999 233 aa13.14□□□□□ -0.31
TRIM50-203ENST00000488217 QDPRP09417 244 aa13.14□□□□□ -0.31
TRIM50-203ENST00000488217 NAT2P11245 290 aa13.14□□□□□ -0.31
TRIM50-203ENST00000488217 ACHEP22303 614 aa13.14□□□□□ -0.31
TRIM50-203ENST00000488217 GPR6P46095 362 aaPredicted RBP13.14□□□□□ -0.31
TRIM50-203ENST00000488217 SELENOVP59797 346 aa13.14□□□□□ -0.31
TRIM50-203ENST00000488217 MRPS11P82912 194 aaKnown RBP13.14□□□□□ -0.31
TRIM50-203ENST00000488217 PATL1Q86TB9 770 aaKnown RBP13.14□□□□□ -0.31
TRIM50-203ENST00000488217 SLC30A8Q8IWU4 369 aa13.14□□□□□ -0.31
TRIM50-203ENST00000488217 OR4D11Q8NGI4 311 aa13.14□□□□□ -0.31
TRIM50-203ENST00000488217 DYDC1Q8WWB3 177 aa13.14□□□□□ -0.31
TRIM50-203ENST00000488217 MPP4Q96JB8 637 aa13.14□□□□□ -0.31
TRIM50-203ENST00000488217 CGREF1Q99674 301 aa13.14□□□□□ -0.31
TRIM50-203ENST00000488217 SH3GL3Q99963 347 aa13.14□□□□□ -0.31
TRIM50-203ENST00000488217 SLC19A3Q9BZV2 496 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms