RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 PIGXQ8TBF5 258 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 MAGEE2Q8TD90 523 aaPredicted RBP9.9□□□□□ -0.82
TRIM56-204ENST00000487252 GTF2H4Q92759 462 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 BCL2L2Q92843 193 aaPredicted RBP9.9□□□□□ -0.82
TRIM56-204ENST00000487252 BBS4Q96RK4 519 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 PARPBPQ9NWS1 579 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 MAGEL2Q9UJ55 1249 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 TMED5Q9Y3A6 229 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 WIPI2Q9Y4P8 454 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 FLVCR1Q9Y5Y0 555 aa9.9□□□□□ -0.82
TRIM56-204ENST00000487252 MDFIC2A0A1B0GVS7 189 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 SULT2B1O00204 365 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 SEC22BO75396 215 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 TIPRLO75663 272 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 IL3P08700 152 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 IFI6P09912 130 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 SMIM18P0DKX4 95 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 IGHV4-38-2P0DP08 117 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 MAPK1P28482 360 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 ALDH3B1P43353 468 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 SNTB2Q13425 540 aaKnown RBP9.89□□□□□ -0.83
TRIM56-204ENST00000487252 SELPLGQ14242 412 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 ATP6AP1Q15904 470 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 PRSS53Q2L4Q9 553 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 RUNDC3AQ59EK9 446 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 OTUD3Q5T2D3 398 aaPredicted RBP9.89□□□□□ -0.83
TRIM56-204ENST00000487252 LRIF1Q5T3J3 769 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 FOXB2Q5VYV0 432 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 TMEM107Q6UX40 140 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 CASP12Q6UXS9 341 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 AMIGO2Q86SJ2 522 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 MSRB3Q8IXL7 192 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 RIMKLAQ8IXN7 391 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 EME1Q96AY2 570 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 TESCQ96BS2 214 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 ELP4Q96EB1 424 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 CENPNQ96H22 339 aaPredicted RBP9.89□□□□□ -0.83
TRIM56-204ENST00000487252 METTL2AQ96IZ6 378 aaKnown RBP9.89□□□□□ -0.83
TRIM56-204ENST00000487252 ZNF583Q96ND8 569 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 SLC29A1Q99808 456 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 SLC30A2Q9BRI3 323 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 CHIAQ9BZP6 476 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 DPY30Q9C005 99 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 NELFAQ9H3P2 528 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 SLC6A13Q9NSD5 602 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 EGFL7Q9UHF1 273 aa9.89□□□□□ -0.83
TRIM56-204ENST00000487252 A0A096LPI6 279 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 TRAPPC2LH3BP13 241 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 K7EIL1 84 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 SCDO00767 359 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 DNPH1O43598 174 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 PIP5K1CO60331 668 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 KCNK2O95069 426 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 ZCCHC18P0CG32 403 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 HSD3B1P14060 373 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 ZNF12P17014 697 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 NR4A1P22736 598 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 FASP25445 335 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 HSD3B2P26439 372 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 CRYBB2P43320 205 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 DAG1Q14118 895 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 PTGR1Q14914 329 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 IMPG1Q17R60 797 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 SGO1Q5FBB7 561 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 FKBP9P1Q75LS8 142 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 JAZF1Q86VZ6 243 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 CALHM3Q86XJ0 350 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 CCDC103Q8IW40 242 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 GALNT4Q8N4A0 578 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 TMEM86BQ8N661 226 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 C1orf52Q8N6N3 182 aaKnown RBP9.88□□□□□ -0.83
TRIM56-204ENST00000487252 SELENOMQ8WWX9 145 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 SGCDQ92629 289 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 TMEM45BQ96B21 275 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 LYSTQ99698 3801 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 SEMA6AQ9H2E6 1030 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 NOX3Q9HBY0 568 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 GIMAP4Q9NUV9 329 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 DDX18Q9NVP1 670 aaKnown RBP9.88□□□□□ -0.83
TRIM56-204ENST00000487252 SLC25A37Q9NYZ2 338 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 VAPAQ9P0L0 249 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 MYEF2Q9P2K5 600 aaKnown RBP9.88□□□□□ -0.83
TRIM56-204ENST00000487252 SEC14L4Q9UDX3 406 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 SLC9A8Q9Y2E8 581 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 INSIG2Q9Y5U4 225 aa9.88□□□□□ -0.83
TRIM56-204ENST00000487252 DOCK11Q5JSL3 2073 aa9.87□□□□□ -0.83
TRIM56-204ENST00000487252 H0YL77 283 aa9.87□□□□□ -0.83
TRIM56-204ENST00000487252 DLGAP1O14490 977 aa9.87□□□□□ -0.83
TRIM56-204ENST00000487252 FOXH1O75593 365 aa9.87□□□□□ -0.83
TRIM56-204ENST00000487252 PMS2P2O95744 297 aa9.87□□□□□ -0.83
TRIM56-204ENST00000487252 NUDT14O95848 222 aa9.87□□□□□ -0.83
TRIM56-204ENST00000487252 PPIAL4GP0DN37 164 aa9.87□□□□□ -0.83
TRIM56-204ENST00000487252 HOXB1P14653 301 aaPredicted RBP9.87□□□□□ -0.83
TRIM56-204ENST00000487252 HPGDP15428 266 aa9.87□□□□□ -0.83
TRIM56-204ENST00000487252 CBR1P16152 277 aa9.87□□□□□ -0.83
TRIM56-204ENST00000487252 SDC1P18827 310 aa9.87□□□□□ -0.83
TRIM56-204ENST00000487252 CDH2P19022 906 aaPredicted RBP9.87□□□□□ -0.83
TRIM56-204ENST00000487252 RNF144AP50876 292 aaPredicted RBP9.87□□□□□ -0.83
TRIM56-204ENST00000487252 GZMMP51124 257 aa9.87□□□□□ -0.83
TRIM56-204ENST00000487252 UBE2NP61088 152 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms