RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ZCCHC12Q6PEW1 402 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 TMEM107Q6UX40 140 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 UNQ6126/PRO20091Q6UXV3 157 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 TFAP2EQ6VUC0 442 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 TIFABQ6ZNK6 161 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 IKBIPQ70UQ0 350 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 SLC22A9Q8IVM8 553 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 MISPQ8IVT2 679 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 TUSC5Q8IXB3 177 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 PHC2Q8IXK0 858 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 CNPY4Q8N129 248 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 MMGT1Q8N4V1 131 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 CDRT4Q8N9R6 151 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 MAPK1IP1LQ8NDC0 245 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 OR6Y1Q8NGX8 325 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 OR4C3Q8NH37 302 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 OR2V1Q8NHB1 315 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 CEP70Q8NHQ1 597 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 FAM110BQ8TC76 370 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 GPR151Q8TDV0 419 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 RNF128Q8TEB7 428 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 DCAKDQ8WVC6 231 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 SECTM1Q8WVN6 248 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 ROBO4Q8WZ75 1007 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 CPNE4Q96A23 557 aaPredicted RBP3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 S100PBPQ96BU1 408 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 L3HYPDHQ96EM0 354 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 METTL2AQ96IZ6 378 aaKnown RBP3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 TMEM237Q96Q45 408 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 PAFAH2Q99487 392 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 RHNO1Q9BSD3 238 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 TRAF4Q9BUZ4 470 aaPredicted RBP3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 EBPLQ9BY08 206 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 IQCGQ9H095 443 aaKnown RBP3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 GLIPR2Q9H4G4 154 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 MYNNQ9NPC7 610 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 NOX4Q9NPH5 578 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 TIGARQ9NQ88 270 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 MIEF1Q9NQG6 463 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 UBQLN4Q9NRR5 601 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 MED17Q9NVC6 651 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 DDX18Q9NVP1 670 aaKnown RBP3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 FAIMQ9NVQ4 179 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 TMEM160Q9NX00 188 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 NINJ2Q9NZG7 142 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 OR6C3Q9NZP0 311 aa3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 ANK3Q12955 4377 aaKnown RBP3.46□□□□□ -1.86
SNRNP40-205ENST00000486941 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 A0A087WUV0 522 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 A0A096LNT2 108 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 GOLGA8QA0A0J9YX86 632 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 hDV102S1A0JD36 115 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 GOLGA8OA6NCC3 632 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 OR6C68A6NDL8 312 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 GJE1A6NN92 205 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 GOLGA8NF8WBI6 632 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 H3BQF6 201 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 GOLGA8RI6L899 631 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 P2RY10O00398 339 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF195O14628 629 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 PHF1O43189 567 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 EFNA2O43921 213 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 GMFGO60234 142 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 TBX19O60806 448 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 RSL1D1O76021 490 aaKnown RBP3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 KCNK2O95069 426 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 ADAP00813 363 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 OPN1LWP04000 364 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 LINGO3P0C6S8 592 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 HPGDP15428 266 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 ELK4P28324 431 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 CASQ1P31415 396 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 TTKP33981 857 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 GNALP38405 381 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 FRKP42685 505 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 VEGFCP49767 419 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 BSPH1Q075Z2 132 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 LOXL1Q08397 574 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 IL13RA2Q14627 380 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 KIAA0040Q15053 153 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF239Q16600 458 aaKnown RBP3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 IMPG1Q17R60 797 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 TMEM176BQ3YBM2 270 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 AGAP6Q5VW22 663 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 FAM219BQ5XKK7 198 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 NOXRED1Q6NXP6 359 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 C8orf74Q6P047 294 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 Q6ZT83 130 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 FCRLAQ7L513 359 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 BHLHA15Q7RTS1 189 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 NUFIP2Q7Z417 695 aaKnown RBP3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 MTERF4Q7Z6M4 381 aaKnown RBP3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 P2RY8Q86VZ1 359 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 TDRPQ86YL5 185 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 SLC43A2Q8N370 569 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 CDC26Q8NHZ8 85 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 LRRC8CQ8TDW0 803 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 ABHD3Q8WU67 409 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 PIK3R3Q92569 461 aa3.45□□□□□ -1.86
SNRNP40-205ENST00000486941 C3orf49Q96BT1 292 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms