RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 LYVE1Q9Y5Y7 322 aa11.52□□□□□ -0.57
SF1-216ENST00000486867 CELSR1Q9NYQ6 3014 aa11.52□□□□□ -0.57
SF1-216ENST00000486867 TRAV27A0A087WT01 109 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 TCRBV3S1A0A5B6 114 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 IGLV1-44P01699 117 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 IGHG1P01857 330 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 F13BP05160 661 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 RAP2AP10114 183 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 SAGP10523 405 aaPredicted RBP11.51□□□□□ -0.57
SF1-216ENST00000486867 ACADSP16219 412 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 RRM2P31350 389 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 GPR4P46093 362 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 GSSP48637 474 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 CSNK1A1P48729 337 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 RASSF2P50749 326 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 FXYD6P3P58550 94 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 RPL27P61353 136 aaKnown RBP11.51□□□□□ -0.57
SF1-216ENST00000486867 ARF1P84077 181 aaKnown RBP11.51□□□□□ -0.57
SF1-216ENST00000486867 SPIBQ01892 262 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 CHRNB3Q05901 458 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 RUNX1T1Q06455 604 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 GK3PQ14409 553 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 NRN1LQ496H8 165 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 FAM98BQ52LJ0 330 aaKnown RBP11.51□□□□□ -0.57
SF1-216ENST00000486867 ALG10Q5BKT4 473 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 C9orf135Q5VTT2 229 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 FAM205BPQ63HN1 556 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 RRM2BQ7LG56 351 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 FAM122BQ7Z309 247 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 ZER1Q7Z7L7 766 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 OR52N5Q8NH56 324 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 LILRB1Q8NHL6 650 aaPredicted RBP11.51□□□□□ -0.57
SF1-216ENST00000486867 ZNF566Q969W8 418 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 MBD6Q96DN6 1003 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 ALPK1Q96QP1 1244 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 TNFRSF13CQ96RJ3 184 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 KCNK17Q96T54 332 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 GPA33Q99795 319 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 TRIM15Q9C019 465 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 LRMDAQ9H2I8 198 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 MMADHCQ9H3L0 296 aaPredicted RBP11.51□□□□□ -0.57
SF1-216ENST00000486867 LIME1Q9H400 295 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 SMURF2Q9HAU4 748 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 SLC7A8Q9UHI5 535 aa11.51□□□□□ -0.57
SF1-216ENST00000486867 AKAP9Q99996 3911 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 M0R3G1 203 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 MGRN1O60291 552 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 TRMUO75648 421 aaKnown RBP11.5□□□□□ -0.57
SF1-216ENST00000486867 WNT11O96014 354 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 CD14P08571 375 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 FPR3P25089 353 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 PTAFRP25105 342 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 BSPH1Q075Z2 132 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 FOXD4Q12950 439 aaPredicted RBP11.5□□□□□ -0.57
SF1-216ENST00000486867 MELKQ14680 651 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 TESK1Q15569 626 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 HIKESHIQ53FT3 197 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 C10orf128Q5T292 105 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 CARD17Q5XLA6 110 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 ZNF770Q6IQ21 691 aaPredicted RBP11.5□□□□□ -0.57
SF1-216ENST00000486867 C1orf94Q6P1W5 598 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 TMEM108Q6UXF1 575 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 ZNF704Q6ZNC4 412 aaPredicted RBP11.5□□□□□ -0.57
SF1-216ENST00000486867 MEX3DQ86XN8 651 aaKnown RBP11.5□□□□□ -0.57
SF1-216ENST00000486867 LINC00471Q8N535 108 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 PAPD5Q8NDF8 572 aaKnown RBP11.5□□□□□ -0.57
SF1-216ENST00000486867 NOXO1Q8NFA2 376 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 OR6N1Q8NGY5 312 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 OR52J3Q8NH60 311 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 OR51A7Q8NH64 312 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 NRGNQ92686 78 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 FAM46AQ96IP4 442 aaKnown RBP11.5□□□□□ -0.57
SF1-216ENST00000486867 ALG12Q9BV10 488 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 ULBP2Q9BZM5 246 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 B3GNT2Q9NY97 397 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 EDARQ9UNE0 448 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 MGAT4BQ9UQ53 548 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 RNF115Q9Y4L5 304 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 USF3Q68DE3 2245 aa11.5□□□□□ -0.57
SF1-216ENST00000486867 DHRS12A0PJE2 317 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 SHISA9B4DS77 424 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 MCIDASD6RGH6 385 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 HS3ST1O14792 307 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 DHHO43323 396 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 AHCYL1O43865 530 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 SERPINI2O75830 405 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 ATE1O95260 518 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 TXNDC12O95881 172 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 PLAUP00749 431 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 IGKV3-15P01624 115 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 RAF1P04049 648 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 CD3EP07766 207 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 APEHP13798 732 aaKnown RBP11.49□□□□□ -0.57
SF1-216ENST00000486867 CD53P19397 219 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 CD40P25942 277 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 HOXC12P31275 282 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 CTXN1P60606 82 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 FLOT2Q14254 428 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 FBXW10Q5XX13 1052 aa11.49□□□□□ -0.57
SF1-216ENST00000486867 OR2T5Q6IEZ7 315 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms