RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 RAB3DO95716 219 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 NGFRP08138 427 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 PGAM2P15259 253 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 MUC1P15941 1255 aaPredicted RBP9.7□□□□□ -0.86
CCDC171-208ENST00000486641 F2RL1P55085 397 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 NKAPLQ5M9Q1 402 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 LPCAT3Q6P1A2 487 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 TMEM200AQ86VY9 491 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 ZNF227Q86WZ6 799 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 TMEM25Q86YD3 366 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 GALNT16Q8N428 558 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 C15orf54Q8N8G6 183 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 OR6K6Q8NGW6 343 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 OR5AK2Q8NH90 309 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 CYB5D2Q8WUJ1 264 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 TMED6Q8WW62 240 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 DTD2Q96FN9 168 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 LINC00615Q96LM1 132 aaPredicted RBP9.7□□□□□ -0.86
CCDC171-208ENST00000486641 TCEAL7Q9BRU2 100 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 LAT2Q9GZY6 243 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 SMCO4Q9NRQ5 59 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 FRRS1LQ9P0K9 344 aa9.7□□□□□ -0.86
CCDC171-208ENST00000486641 METTL1Q9UBP6 276 aaKnown RBP9.7□□□□□ -0.86
CCDC171-208ENST00000486641 FAM171A2A8MVW0 826 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 WRBO00258 174 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 ALOX12BO75342 701 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 HLA-AP01891 365 aaKnown RBP9.69□□□□□ -0.86
CCDC171-208ENST00000486641 AMY2AP04746 511 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 THBS1P07996 1170 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 TPT1P13693 172 aaKnown RBP9.69□□□□□ -0.86
CCDC171-208ENST00000486641 AGAP20933 346 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 AK4P27144 223 aaPredicted RBP9.69□□□□□ -0.86
CCDC171-208ENST00000486641 AKR1C3P42330 323 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 GPR1P46091 355 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 PRKXP51817 358 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 ACTR1AP61163 376 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 ZNF684Q5T5D7 378 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 TMEM215Q68D42 235 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 ABHD17CQ6PCB6 329 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 FIP1L1Q6UN15 594 aaKnown RBP9.69□□□□□ -0.86
CCDC171-208ENST00000486641 IL34Q6ZMJ4 242 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 ABHD13Q7L211 337 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 SLC29A4Q7RTT9 530 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 BAP18Q8IXM2 172 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 NRSN1Q8IZ57 195 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 ZNF561Q8N587 486 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 LINC01555Q8NAE3 123 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 SLC30A7Q8NEW0 376 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 ZPLD1Q8TCW7 415 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 GPX8Q8TED1 209 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 DOK4Q8TEW6 326 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 MRPL38Q96DV4 380 aaKnown RBP9.69□□□□□ -0.86
CCDC171-208ENST00000486641 NMNAT3Q96T66 252 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 WDR77Q9BQA1 342 aaPredicted RBP9.69□□□□□ -0.86
CCDC171-208ENST00000486641 SLC25A21Q9BQT8 299 aaPredicted RBP9.69□□□□□ -0.86
CCDC171-208ENST00000486641 RSRP1Q9BUV0 290 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 HRH4Q9H3N8 390 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 SEMA6CQ9H3T2 930 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 RHOFQ9HBH0 211 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 SLC23A2Q9UGH3 650 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 ADAM18Q9Y3Q7 739 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 ZNF780BQ9Y6R6 833 aa9.69□□□□□ -0.86
CCDC171-208ENST00000486641 TBC1D3KA0A087X1G2 549 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 A0A0B4J2A0 478 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 TBC1D3BA6NDS4 549 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 TBC1D3FA6NER0 549 aaPredicted RBP9.68□□□□□ -0.86
CCDC171-208ENST00000486641 MCIDASD6RGH6 385 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 NRG2O14511 850 aaPredicted RBP9.68□□□□□ -0.86
CCDC171-208ENST00000486641 ZNF208O43345 1280 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 SFTA3P0C7M3 94 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 OR8G3PP0DMU2 310 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 CYBAP13498 195 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 SELLP14151 372 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 AVPR2P30518 371 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 AQP2P41181 271 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 BCL6P41182 706 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 CENPAP49450 140 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 TAS2R19P59542 299 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 SSTP61278 116 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 PRKCZQ05513 592 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 AIMP2Q13155 320 aaKnown RBP9.68□□□□□ -0.86
CCDC171-208ENST00000486641 ARHGAP19Q14CB8 494 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 ELAVL1Q15717 326 aaKnown RBP9.68□□□□□ -0.86
CCDC171-208ENST00000486641 CEBPEQ15744 281 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 ZIC1Q15915 447 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 TMEM35AQ53FP2 167 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 OR2B11Q5JQS5 317 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 PRAMEF17Q5VTA0 474 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 TBC1D3GQ6DHY5 549 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 TMEM205Q6UW68 189 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 ADIPOR2Q86V24 386 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 NLGN2Q8NFZ4 835 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 OR5K2Q8NHB8 316 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 NUBPLQ8TB37 319 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 POTEKPQ9BYX7 375 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 SEC61A2Q9H9S3 476 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 MYOZ1Q9NP98 299 aaPredicted RBP9.68□□□□□ -0.86
CCDC171-208ENST00000486641 CYTL1Q9NRR1 136 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 IL36AQ9UHA7 158 aa9.68□□□□□ -0.86
CCDC171-208ENST00000486641 SHPKQ9UHJ6 478 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms