RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 Q8NA96 180 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 OR2T4Q8NH00 348 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 CPT1CQ8TCG5 803 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 ZPLD1Q8TCW7 415 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 ZMYND19Q96E35 227 aaPredicted RBP13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 MRPL48Q96GC5 212 aaKnown RBP13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 TBX5Q99593 518 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 ALG12Q9BV10 488 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 CHST11Q9NPF2 352 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 FANCFQ9NPI8 374 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 BABAM2Q9NXR7 383 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 STMN3Q9NZ72 180 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 SSR3Q9UNL2 185 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 B3GALT5Q9Y2C3 310 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 CSAG2Q9Y5P2 127 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 NPIPB13A6NJU9 1138 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 NPIPB4C9JG80 1138 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 ARHGEF9O43307 516 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 MT-ND5P03915 603 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 IL11P20809 199 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 CD79BP40259 229 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 ARG2P78540 354 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 ABHD17BQ5VST6 288 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 MDGA2Q7Z553 956 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 SLC35F2Q8IXU6 374 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 BEST3Q8N1M1 668 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 GHDCQ8N2G8 530 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 ADPRHL1Q8NDY3 354 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 OR51L1Q8NGJ5 315 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 OR6K6Q8NGW6 343 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 ZNF519Q8TB69 540 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 DTNBP1Q96EV8 351 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 CENPOQ9BU64 300 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 TRIM36Q9NQ86 728 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 ANKRD10Q9NXR5 420 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 DKKL1Q9UK85 242 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 HDGFL3Q9Y3E1 203 aa13.08□□□□□ -0.31
POLR2J3-204ENST00000486319 HELZ2Q9BYK8 2649 aaKnown RBP13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 FREM3P0C091 2139 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 MS4A18H0YCH9 400 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 CDK2AP1O14519 115 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 GPX5O75715 221 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 PLGP00747 810 aaPredicted RBP13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 ZNF17P17021 662 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 GABRA5P31644 462 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 CRYBB2P43320 205 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 CENPAP49450 140 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 DAP3P51398 398 aaKnown RBP13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 RPS3AP61247 264 aaKnown RBP13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 ACTA2P62736 377 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 ACTG2P63267 376 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 FOXK1P85037 733 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 OC90Q02509 493 aaPredicted RBP13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 ZNF85Q03923 595 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 HSF2Q03933 536 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 MYBPHQ13203 477 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 GPR50Q13585 617 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 MS4A18Q3C1V0 323 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 GLYR1Q49A26 553 aaPredicted RBP13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 LINC01590Q5TEZ4 76 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 FAM205BPQ63HN1 556 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 KLBQ86Z14 1044 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 TBC1D15Q8TC07 691 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 HAS2Q92819 552 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 JSRP1Q96MG2 331 aaPredicted RBP13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 C5orf34Q96MH7 638 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 GNRHR2Q96P88 292 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 EXOSC4Q9NPD3 245 aaKnown RBP13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 PLA2G3Q9NZ20 509 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 FKBP7Q9Y680 259 aa13.08□□□□□ -0.32
POLR2J3-204ENST00000486319 KIAA1549Q9HCM3 1950 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 A0A1W2PNV4 684 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 A0A1W2PQL4 384 aaPredicted RBP13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 A6NIZ1 184 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 SEC14L5O43304 696 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 LALBAP00709 142 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 TFP02787 698 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 TCEA1P23193 301 aaKnown RBP13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 TGFBR1P36897 503 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 BLVRAP53004 296 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 TAS2R43P59537 309 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 RAP1BP61224 184 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 RAP1AP62834 184 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 DBPQ10586 325 aaPredicted RBP13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 EEF1A1P5Q5VTE0 462 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 PXKQ7Z7A4 578 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 SYS1Q8N2H4 156 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 CISD2Q8N5K1 135 aaKnown RBP13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 OR5M1Q8NGP8 315 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 ZNRF4Q8WWF5 429 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 MIB2Q96AX9 1013 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 OR5B2Q96R09 309 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 TIMP4Q99727 224 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 COQ7Q99807 217 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 PIGQQ9BRB3 760 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 ISG20L2Q9H9L3 353 aaKnown RBP13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 SRA1Q9HD15 236 aaKnown RBP13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 VSX1Q9NZR4 365 aaPredicted RBP13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 TRAPPC4Q9Y296 219 aa13.07□□□□□ -0.32
POLR2J3-204ENST00000486319 SF3B6Q9Y3B4 125 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms