RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 OR56B1Q8NGI3 324 aa4.53□□□□□ -1.68
RTN4-214ENST00000486085 VN1R17PQ8TDU5 208 aa4.53□□□□□ -1.68
RTN4-214ENST00000486085 C9orf85Q96MD7 179 aa4.53□□□□□ -1.68
RTN4-214ENST00000486085 VPS35Q96QK1 796 aa4.53□□□□□ -1.68
RTN4-214ENST00000486085 FMO2Q99518 471 aa4.53□□□□□ -1.68
RTN4-214ENST00000486085 EBNA1BP2Q99848 306 aaKnown RBP4.53□□□□□ -1.68
RTN4-214ENST00000486085 NMNAT2Q9BZQ4 307 aa4.53□□□□□ -1.68
RTN4-214ENST00000486085 C1orf21Q9H246 121 aa4.53□□□□□ -1.68
RTN4-214ENST00000486085 MED4Q9NPJ6 270 aa4.53□□□□□ -1.68
RTN4-214ENST00000486085 DCAF13Q9NV06 445 aaKnown RBP4.53□□□□□ -1.68
RTN4-214ENST00000486085 NLE1Q9NVX2 485 aaPredicted RBP4.53□□□□□ -1.68
RTN4-214ENST00000486085 IL17CQ9P0M4 197 aa4.53□□□□□ -1.68
RTN4-214ENST00000486085 GHRLQ9UBU3 117 aa4.53□□□□□ -1.68
RTN4-214ENST00000486085 FADS3Q9Y5Q0 445 aa4.53□□□□□ -1.68
RTN4-214ENST00000486085 DMDP11532 3685 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 PLXNA2O75051 1894 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 IGLV3-16A0A075B6K0 115 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 A0A1W2PQ72 361 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 LGALS8O00214 317 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 IMPA2O14732 288 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 RASGRF2O14827 1237 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 ATP8B1O43520 1251 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 ERLIN1O75477 346 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 ALPIP09923 528 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 SLC35G4P0C7Q5 338 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 GABRG2P18507 467 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 OGNP20774 298 aaKnown RBP4.52□□□□□ -1.69
RTN4-214ENST00000486085 P2RY2P41231 377 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 CXCL12P48061 93 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 PLTPP55058 493 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 MAXP61244 160 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 VSNL1P62760 191 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 RPS21P63220 83 aaKnown RBP4.52□□□□□ -1.69
RTN4-214ENST00000486085 BASP1P80723 227 aaKnown RBP4.52□□□□□ -1.69
RTN4-214ENST00000486085 XIAPP98170 497 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 FUT7Q11130 342 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 OVGP1Q12889 678 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 DNAJC3Q13217 504 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 SPANXN3Q5MJ09 141 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 HENMT1Q5T8I9 393 aaKnown RBP4.52□□□□□ -1.69
RTN4-214ENST00000486085 AP1ARQ63HQ0 302 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 CERS6Q6ZMG9 384 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 Q6ZS52 159 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 CROCCP2Q86T23 111 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 SLC26A11Q86WA9 606 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 TBC1D21Q8IYX1 336 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 SPAG16Q8N0X2 631 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 STK40Q8N2I9 435 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 RIBC1Q8N443 379 aaPredicted RBP4.52□□□□□ -1.69
RTN4-214ENST00000486085 CD177Q8N6Q3 437 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 ZBTB44Q8NCP5 570 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 ZNF540Q8NDQ6 660 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 IPMKQ8NFU5 416 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 OR2T34Q8NGX1 318 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 ZPLD1Q8TCW7 415 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 NCLNQ969V3 563 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 ZSCAN5AQ9BUG6 496 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 FICDQ9BVA6 458 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 PARD6BQ9BYG5 372 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 TM6SF2Q9BZW4 377 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 MFSD1Q9H3U5 465 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 DYRK4Q9NR20 520 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 HPF1Q9NWY4 346 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 SENP1Q9P0U3 644 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 P2RX2Q9UBL9 471 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 SNX24Q9Y343 169 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 DHRS7Q9Y394 339 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 KMT2EQ8IZD2 1858 aa4.52□□□□□ -1.69
RTN4-214ENST00000486085 OTOGLQ3ZCN5 2332 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 NOTCH3Q9UM47 2321 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 FAM159BA6NKW6 160 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 H0YC42 278 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 TOXO94900 526 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 PTBP3O95758 552 aaKnown RBP4.51□□□□□ -1.69
RTN4-214ENST00000486085 GUCA1CO95843 209 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 AGTP01019 485 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 UGT2B4P06133 528 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 HLA-EP13747 358 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 CCNA2P20248 432 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 IL10P22301 178 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 RPS3P23396 243 aaKnown RBP eCLIP4.51□□□□□ -1.693e-15■□□□□ 9.2
RTN4-214ENST00000486085 PTPN6P29350 595 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 GRIA1P42261 906 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 SPINT3P49223 89 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 TPMTP51580 245 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 METAP1P53582 386 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 ITIH4Q14624 930 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 TNFAIP8L3Q5GJ75 292 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 RAET1GQ6H3X3 334 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 BAIAP2L2Q6UXY1 529 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 GCNT7Q6ZNI0 430 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 HORMAD1Q86X24 394 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 LRRC6Q86X45 466 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 MMAAQ8IVH4 418 aaKnown RBP4.51□□□□□ -1.69
RTN4-214ENST00000486085 IQCKQ8N0W5 287 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 TRAM1L1Q8N609 369 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 MINDY2Q8NBR6 621 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 KLHL30-AS1Q8NEE0 82 aa4.51□□□□□ -1.69
RTN4-214ENST00000486085 FAM71CQ8NEG0 241 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms