RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 IFNGP01579 166 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 HMGN1P05114 100 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 F13BP05160 661 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 TSPAN19P0C672 248 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 ACADSP16219 412 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 ZNF23P17027 643 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 CDH2P19022 906 aaPredicted RBP7.3□□□□□ -1.24
SF3A1-208ENST00000485618 KLK2P20151 261 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 NPR2P20594 1047 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 SSTR2P30874 369 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 SDHAP31040 664 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 ACVR1BP36896 505 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 LIMS1P48059 325 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 GSSP48637 474 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 SELENOPP49908 381 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 ROR2Q01974 943 aaKnown RBP7.3□□□□□ -1.24
SF3A1-208ENST00000485618 TFF3Q07654 80 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 FAM27E3Q08E93 113 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 CAMK2DQ13557 499 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 SEC23BQ15437 767 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 ACKR1Q16570 336 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 TIMM23BQ5SRD1 257 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 THEM4Q5T1C6 240 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 CARD17Q5XLA6 110 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 PGBD2Q6P3X8 592 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 ANKRD16Q6P6B7 361 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 DNM1P34Q6PK57 102 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 KLHL17Q6TDP4 642 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 CD300LDQ6UXZ3 194 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 STAC2Q6ZMT1 411 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 RASSF6Q6ZTQ3 369 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 DEPDC4Q8N2C3 294 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 CLDN22Q8N7P3 220 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 ARIH2OSQ8N7S6 290 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 OR4C15Q8NGM1 316 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 TEX47Q8TBZ9 253 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 NANOS1Q8WY41 292 aaKnown RBP7.3□□□□□ -1.24
SF3A1-208ENST00000485618 GPX7Q96SL4 187 aaPredicted RBP7.3□□□□□ -1.24
SF3A1-208ENST00000485618 FEVQ99581 238 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 KATNB1Q9BVA0 655 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 IFT27Q9BW83 186 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 PRRG3Q9BZD7 231 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 ULBP2Q9BZM5 246 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 ACTR6Q9GZN1 396 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 DENND2DQ9H6A0 471 aaPredicted RBP7.3□□□□□ -1.24
SF3A1-208ENST00000485618 SMURF2Q9HAU4 748 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 CRLF2Q9HC73 371 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 SLC7A10Q9NS82 523 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 SEC14L4Q9UDX3 406 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 FBXL3Q9UKT7 428 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 SIGLEC7Q9Y286 467 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 CDH10Q9Y6N8 788 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 SETD2Q9BYW2 2564 aaPredicted RBP7.3□□□□□ -1.24
SF3A1-208ENST00000485618 POLQO75417 2590 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 CSMD2Q7Z408 3487 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 OR5H1A6NKK0 313 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 ZNF99A8MXY4 864 aaPredicted RBP7.29□□□□□ -1.24
SF3A1-208ENST00000485618 H0YHG0 523 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 H3BN98 237 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 CDC42EP2O14613 210 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 ARPC3O15145 178 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 ARHGEF9O43307 516 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 KLF4O43474 513 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 BAG2O95816 211 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 HPRP00739 348 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 RENP00797 406 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 GASTP01350 101 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 IGHV3-9P01782 118 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 IGHMP01871 453 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 HLA-DOBP13765 273 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 COX5AP20674 150 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 CRABP1P29762 137 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 ERFP50548 548 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 NR1H2P55055 460 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 ERVK-25P63136 954 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 CD47Q08722 323 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 TOP3AQ13472 1001 aaPredicted RBP7.29□□□□□ -1.24
SF3A1-208ENST00000485618 NRN1LQ496H8 165 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 TSPO2Q5TGU0 170 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 JAZF1Q86VZ6 243 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 TMEM123Q8N131 208 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 ZNF433Q8N7K0 673 aaPredicted RBP7.29□□□□□ -1.24
SF3A1-208ENST00000485618 OR2T33Q8NG76 320 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 MOSPD2Q8NHP6 518 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 MAGEE2Q8TD90 523 aaPredicted RBP7.29□□□□□ -1.24
SF3A1-208ENST00000485618 PYDC1Q8WXC3 89 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 ASB10Q8WXI3 467 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 UTP4Q969X6 686 aaKnown RBP7.29□□□□□ -1.24
SF3A1-208ENST00000485618 GTPBP3Q969Y2 492 aaKnown RBP7.29□□□□□ -1.24
SF3A1-208ENST00000485618 SLCO4A1Q96BD0 722 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 TXNDC15Q96J42 360 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 RADILQ96JH8 1075 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 ZNF570Q96NI8 536 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 MUS81Q96NY9 551 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 RBM4BQ9BQ04 359 aaKnown RBP7.29□□□□□ -1.24
SF3A1-208ENST00000485618 EMC6Q9BV81 110 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 RBM4Q9BWF3 364 aaKnown RBP7.29□□□□□ -1.24
SF3A1-208ENST00000485618 ESRP2Q9H6T0 727 aaKnown RBP7.29□□□□□ -1.24
SF3A1-208ENST00000485618 GPR35Q9HC97 309 aa7.29□□□□□ -1.24
SF3A1-208ENST00000485618 S100A14Q9HCY8 104 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms