RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 TUBA1BP68363 451 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 TUBA4AP68366 448 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 HIST3H3Q16695 136 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 ANKDD1AQ495B1 522 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 LRFN4Q6PJG9 635 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 PAMR1Q6UXH9 720 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 ZNF704Q6ZNC4 412 aaPredicted RBP11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 TUBA1AQ71U36 451 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 SYT14Q8NB59 555 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 NOXO1Q8NFA2 376 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 OR4C15Q8NGM1 316 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 ZNF519Q8TB69 540 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 MAGEE2Q8TD90 523 aaPredicted RBP11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 CANT1Q8WVQ1 401 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 HDAC2Q92769 488 aaKnown RBP11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 RSRC1Q96IZ7 334 aaKnown RBP11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 TSPAN32Q96QS1 320 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 LRMDAQ9H2I8 198 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 ESRP2Q9H6T0 727 aaKnown RBP11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 ST6GALNAC2Q9UJ37 374 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 RNF115Q9Y4L5 304 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 ABCA12Q86UK0 2595 aa11.87□□□□□ -0.51
SOX2-OT-209ENST00000485035 ARPC4-TTLL3A0A0A6YYG9 625 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 ZNF503-AS2A6NEH8 195 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 UNC119BA6NIH7 251 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 TNFRSF11BO00300 401 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 OR10H3O60404 316 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 PTP4A3O75365 173 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 KRT36O76013 467 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 QDPRP09417 244 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 ERFP50548 548 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 RASSF2P50749 326 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 CLRN1P58418 232 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 RPL27P61353 136 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 MYBPC1Q00872 1141 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 SPOCK1Q08629 439 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 PPP1R8Q12972 351 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 TAF11Q15544 211 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 OR2T5Q6IEZ7 315 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 PGBD2Q6P3X8 592 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 KLHL24Q6TFL4 600 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 THSD4Q6ZMP0 1018 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 ZNF627Q7L945 461 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 HDDC2Q7Z4H3 204 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 SPATA24Q86W54 205 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 OR9Q2Q8NGE9 314 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 OR2T29Q8NH02 315 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 LILRB1Q8NHL6 650 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 NMD3Q96D46 503 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 FOXB1Q99853 325 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 KATNB1Q9BVA0 655 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 CHID1Q9BWS9 393 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 UBTD1Q9HAC8 227 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 OBP2BQ9NPH6 170 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 KRCC1Q9NPI7 259 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 IL20RAQ9UHF4 553 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 ZNF346Q9UL40 294 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 TMCC3Q9ULS5 477 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 AURKCQ9UQB9 309 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 POFUT2Q9Y2G5 429 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 PLEKHA6Q9Y2H5 1048 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 ADAM18Q9Y3Q7 739 aa11.86□□□□□ -0.51
SOX2-OT-209ENST00000485035 IGKV1D-43A0A0B4J1Z2 117 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 TCRBV3S1A0A5B6 114 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 CENPBD1B2RD01 187 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 M0R1B8 84 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 DHHO43323 396 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 NDUFB2O95178 105 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 WNT11O96014 354 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 CD3EP07766 207 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 CD14P08571 375 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 B4GALT1P15291 398 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 FPR3P25089 353 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 CD40P25942 277 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 RPL4P36578 427 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 ACVR1BP36896 505 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 GSSP48637 474 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 ZNF133P52736 654 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 UBE2NP61088 152 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 ERVK-25P63136 954 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 CBX1P83916 185 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 FMODQ06828 376 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 C1QTNF12Q5T7M4 302 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 ZNF770Q6IQ21 691 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 ADAM5Q6NVV9 412 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 C1orf94Q6P1W5 598 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 KLHL17Q6TDP4 642 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 TMEM108Q6UXF1 575 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 FAM122BQ7Z309 247 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 CLDN22Q8N7P3 220 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 KBTBD8Q8NFY9 601 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 NEUROG1Q92886 237 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 MCHR2Q969V1 340 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 GPX7Q96SL4 187 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 KCNK17Q96T54 332 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 CCM2LQ9NUG4 571 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 MAGED1Q9Y5V3 778 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 U3KQV3 271 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 LRBAP50851 2863 aa11.85□□□□□ -0.51
SOX2-OT-209ENST00000485035 TACC2O95359 2948 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms