RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 HIST2H3AQ71DI3 136 aa13.98□□□□□ -0.17
RXRA-203ENST00000484822 MDGA2Q7Z553 956 aa13.98□□□□□ -0.17
RXRA-203ENST00000484822 OR56B1Q8NGI3 324 aa13.98□□□□□ -0.17
RXRA-203ENST00000484822 MITD1Q8WV92 249 aa13.98□□□□□ -0.17
RXRA-203ENST00000484822 TMED6Q8WW62 240 aa13.98□□□□□ -0.17
RXRA-203ENST00000484822 ASB17Q8WXJ9 295 aa13.98□□□□□ -0.17
RXRA-203ENST00000484822 TANKQ92844 425 aa13.98□□□□□ -0.17
RXRA-203ENST00000484822 POFUT1Q9H488 388 aa13.98□□□□□ -0.17
RXRA-203ENST00000484822 AKIP1Q9NQ31 210 aa13.98□□□□□ -0.17
RXRA-203ENST00000484822 SLC39A9Q9NUM3 307 aa13.98□□□□□ -0.17
RXRA-203ENST00000484822 NPFFR2Q9Y5X5 522 aa13.98□□□□□ -0.17
RXRA-203ENST00000484822 MAP1BP46821 2468 aaKnown RBP13.97□□□□□ -0.17
RXRA-203ENST00000484822 COL24A1Q17RW2 1714 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 AIFM1O95831 613 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 PMP2P02689 132 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 MMP11P24347 488 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 CD38P28907 300 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 TRA2BP62995 288 aaKnown RBP13.97□□□□□ -0.17
RXRA-203ENST00000484822 GGTA1PQ4G0N0 100 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 ACTBL2Q562R1 376 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 RBMS3Q6XE24 437 aaKnown RBP13.97□□□□□ -0.17
RXRA-203ENST00000484822 FAM57BQ71RH2 274 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 GLCCI1Q86VQ1 547 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 RNF113BQ8IZP6 322 aaKnown RBP13.97□□□□□ -0.17
RXRA-203ENST00000484822 OR52I2Q8NH67 350 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 BSCL2Q96G97 398 aaPredicted RBP13.97□□□□□ -0.17
RXRA-203ENST00000484822 TOE1Q96GM8 510 aaKnown RBP13.97□□□□□ -0.17
RXRA-203ENST00000484822 ZNF286AQ9HBT8 521 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 MRPL22Q9NWU5 206 aaKnown RBP13.97□□□□□ -0.17
RXRA-203ENST00000484822 NDRG4Q9ULP0 352 aaKnown RBP13.97□□□□□ -0.17
RXRA-203ENST00000484822 CXCL10P02778 98 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 FURINP09958 794 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 SRMP19623 302 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 ITGB8P26012 769 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 NPY4RP50391 375 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 HSD17B7P56937 341 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 WBP2NLQ6ICG8 309 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 PLPP7Q8NBV4 271 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 FAM3DQ96BQ1 224 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 SLC25A21Q9BQT8 299 aaPredicted RBP13.97□□□□□ -0.17
RXRA-203ENST00000484822 NUDT22Q9BRQ3 303 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 ANKRD19PQ9H560 264 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 KPTNQ9Y664 436 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 H0YIV9 168 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 CPMP14384 443 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 FOLR1P15328 257 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 KITLGP21583 273 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 UBE2IP63279 158 aaKnown RBP13.97□□□□□ -0.17
RXRA-203ENST00000484822 SNTB1Q13884 538 aaKnown RBP13.97□□□□□ -0.17
RXRA-203ENST00000484822 MELKQ14680 651 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 SLC36A2Q495M3 483 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 SYT14P1Q58G82 188 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 FAM160A2Q8N612 972 aaPredicted RBP13.97□□□□□ -0.17
RXRA-203ENST00000484822 ZNF740Q8NDX6 193 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 OR9A4Q8NGU2 314 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 OR14L1PQ8NHC6 308 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 OR51B6Q9H340 312 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 ATP13A2Q9NQ11 1180 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 OBP2AQ9NY56 170 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 GPR160Q9UJ42 338 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 COL5A3P25940 1745 aaPredicted RBP13.97□□□□□ -0.17
RXRA-203ENST00000484822 CDC14CA4D256 554 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 SULT2B1O00204 365 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 BLVRBP30043 206 aaPredicted RBP13.97□□□□□ -0.17
RXRA-203ENST00000484822 SLC6A11P48066 632 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 P2RX3P56373 397 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 SNRPGP62308 76 aaKnown RBP13.97□□□□□ -0.17
RXRA-203ENST00000484822 GLYATL3Q5SZD4 288 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 GHRLQ9UBU3 117 aa13.97□□□□□ -0.17
RXRA-203ENST00000484822 EXO1Q9UQ84 846 aaKnown RBP13.97□□□□□ -0.17
RXRA-203ENST00000484822 MYO5AQ9Y4I1 1855 aaKnown RBP13.96□□□□□ -0.17
RXRA-203ENST00000484822 BLACEA4D250 179 aa13.96□□□□□ -0.17
RXRA-203ENST00000484822 SLC19A1P41440 591 aa13.96□□□□□ -0.17
RXRA-203ENST00000484822 CNN3Q15417 329 aaKnown RBP13.96□□□□□ -0.17
RXRA-203ENST00000484822 ATPAF1Q5TC12 328 aaPredicted RBP13.96□□□□□ -0.17
RXRA-203ENST00000484822 RTL6Q6ICC9 239 aa13.96□□□□□ -0.17
RXRA-203ENST00000484822 PRICKLE2Q7Z3G6 844 aa13.96□□□□□ -0.17
RXRA-203ENST00000484822 RBM45Q8IUH3 476 aaKnown RBP13.96□□□□□ -0.17
RXRA-203ENST00000484822 SECTM1Q8WVN6 248 aa13.96□□□□□ -0.17
RXRA-203ENST00000484822 ULBP3Q9BZM4 244 aa13.96□□□□□ -0.17
RXRA-203ENST00000484822 PCDHGA5Q9Y5G8 931 aa13.96□□□□□ -0.17
RXRA-203ENST00000484822 FITM1A5D6W6 292 aa13.96□□□□□ -0.17
RXRA-203ENST00000484822 ZFP92A6NM28 416 aa13.96□□□□□ -0.17
RXRA-203ENST00000484822 CLN5O75503 358 aa13.96□□□□□ -0.17
RXRA-203ENST00000484822 IGFBP1P08833 259 aaPredicted RBP13.96□□□□□ -0.17
RXRA-203ENST00000484822 CSF3P09919 207 aa13.96□□□□□ -0.17
RXRA-203ENST00000484822 FJX1Q86VR8 437 aa13.96□□□□□ -0.17
RXRA-203ENST00000484822 SUMF1Q8NBK3 374 aa13.96□□□□□ -0.17
RXRA-203ENST00000484822 C22orf15Q8WYQ4 148 aa13.96□□□□□ -0.17
RXRA-203ENST00000484822 TAF9BQ9HBM6 251 aa13.96□□□□□ -0.17
RXRA-203ENST00000484822 CBLCQ9ULV8 474 aa13.96□□□□□ -0.17
RXRA-203ENST00000484822 ICAM2P13598 275 aa13.96□□□□□ -0.18
RXRA-203ENST00000484822 SPNP16150 400 aa13.96□□□□□ -0.18
RXRA-203ENST00000484822 PTBP1P26599 531 aaKnown RBP eCLIP13.96□□□□□ -0.182e-6■□□□□ 10.7
RXRA-203ENST00000484822 CSNK1A1P48729 337 aa13.96□□□□□ -0.18
RXRA-203ENST00000484822 PLCXD3Q63HM9 321 aa13.96□□□□□ -0.18
RXRA-203ENST00000484822 NAA40Q86UY6 237 aa13.96□□□□□ -0.18
RXRA-203ENST00000484822 UBALD2Q8IYN6 164 aa13.96□□□□□ -0.18
RXRA-203ENST00000484822 UBQLN3Q9H347 655 aa13.96□□□□□ -0.18
RXRA-203ENST00000484822 LGI1O95970 557 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms