RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 MYOZ1Q9NP98 299 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-215ENST00000484203 SLC52A3Q9NQ40 469 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 GID8Q9NWU2 228 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 STX18Q9P2W9 335 aaKnown RBP5.39□□□□□ -1.55
PTCD3-215ENST00000484203 BAG5Q9UL15 447 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 ATP23Q9Y6H3 246 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 USF3Q68DE3 2245 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 MED13LQ71F56 2210 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 EML6Q6ZMW3 1958 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 EXPH5Q8NEV8 1989 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 A0A0B4J2E0 115 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 A0A0G2JND7 137 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 A0A1B0GX12 115 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF726A6NNF4 738 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 FTCDNL1E5RQL4 147 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 M0R1B8 84 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 CHP2O43745 196 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 TLX2O43763 284 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-215ENST00000484203 RAMP1O60894 148 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 DNAJC8O75937 253 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-215ENST00000484203 MFN2O95140 757 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 OR6A2O95222 327 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 LGI1O95970 557 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 IGF2P01344 180 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 HIST1H2ABP04908 130 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 NR2C1P13056 603 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 SLC25A16P16260 332 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 LSP1P33241 339 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 PCGF2P35227 344 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 RPS5P46782 204 aaKnown RBP5.38□□□□□ -1.55
PTCD3-215ENST00000484203 P2RY4P51582 365 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 NUDT6P53370 316 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 SNRPD2P62316 118 aaKnown RBP5.38□□□□□ -1.55
PTCD3-215ENST00000484203 IL1RL1Q01638 556 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 ROR2Q01974 943 aaKnown RBP5.38□□□□□ -1.55
PTCD3-215ENST00000484203 PUDPQ08623 228 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 BNIP2Q12982 314 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 PMS2P3Q13401 168 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 OR1Q1Q15612 314 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 NPTX1Q15818 432 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 ADRM1Q16186 407 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 TRMT5Q32P41 509 aaKnown RBP5.38□□□□□ -1.55
PTCD3-215ENST00000484203 MMEL1Q495T6 779 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 PAGE3Q5JUK9 113 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 NIPAL3Q6P499 406 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 CLEC2AQ6UVW9 174 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 HIST3H2AQ7L7L0 130 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 ARPINQ7Z6K5 226 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 PXKQ7Z7A4 578 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 EPHX4Q8IUS5 362 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 UEVLDQ8IX04 471 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 MSRB3Q8IXL7 192 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 C10orf53Q8N6V4 93 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 WDR31Q8NA23 367 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF540Q8NDQ6 660 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 OR1K1Q8NGR3 316 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 PROX1Q92786 737 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 BCL2L2Q92843 193 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-215ENST00000484203 HIST1H2ACQ93077 130 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 ZBTB9Q96C00 473 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 KTI12Q96EK9 354 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-215ENST00000484203 SLC41A3Q96GZ6 507 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF385AQ96PM9 386 aaKnown RBP5.38□□□□□ -1.55
PTCD3-215ENST00000484203 SLC38A2Q96QD8 506 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 ECSITQ9BQ95 431 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 CPPED1Q9BRF8 314 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-215ENST00000484203 PTDSS2Q9BVG9 487 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 REG4Q9BYZ8 158 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 KAT8Q9H7Z6 458 aaKnown RBP5.38□□□□□ -1.55
PTCD3-215ENST00000484203 SMURF1Q9HCE7 757 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 MED4Q9NPJ6 270 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 MRPL39Q9NYK5 338 aaKnown RBP5.38□□□□□ -1.55
PTCD3-215ENST00000484203 CHST2Q9Y4C5 530 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 SPEF1Q9Y4P9 236 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 FKBP7Q9Y680 259 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 ARHGAP21Q5T5U3 1957 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 FREM3P0C091 2139 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 MED12LQ86YW9 2145 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 ZANQ9Y493 2812 aa5.38□□□□□ -1.55
PTCD3-215ENST00000484203 NCKAP5O14513 1909 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 TRAPPC13A5PLN9 417 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 GMNCA6NCL1 334 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 TRIM64A6NGJ6 449 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 TRIM64BA6NI03 449 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF99A8MXY4 864 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-215ENST00000484203 CENPBD1B2RD01 187 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 B9A039 149 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 E7EQL1 145 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 M0QX08 132 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 NDUFS8O00217 210 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF432O94892 652 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 LY6G6DO95868 133 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 C1QCP02747 245 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 THRBP10828 461 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 CBR1P16152 277 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 CDH2P19022 906 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-215ENST00000484203 EDNRAP25101 427 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 AQP1P29972 269 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 GRPRP30550 384 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 SERPINF1P36955 418 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms