RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 SERPINA1P01009 418 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 IGKV3-15P01624 115 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 IGHV4-39P01824 125 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 IGHG1P01857 330 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 IDH3GP51553 393 aaPredicted RBP12.08□□□□□ -0.48
VARS-225ENST00000482996 RPL18Q07020 188 aaKnown RBP12.08□□□□□ -0.48
VARS-225ENST00000482996 NPRL3Q12980 569 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 MELKQ14680 651 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 ZSCAN26Q16670 478 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 C11orf71Q6IPW1 123 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 CCDC121Q6ZUS5 278 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 CBLL1Q75N03 491 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 ZNF627Q7L945 461 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 MDP1Q86V88 176 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 OFCC1Q8IZS5 231 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 CIARTQ8N365 385 aaPredicted RBP12.08□□□□□ -0.48
VARS-225ENST00000482996 IL17RDQ8NFM7 739 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 LIPHQ8WWY8 451 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 TMEM54Q969K7 222 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 HSH2DQ96JZ2 352 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 FOXB1Q99853 325 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 SPAG4Q9NPE6 437 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 INIPQ9NRY2 104 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 STX18Q9P2W9 335 aaKnown RBP12.08□□□□□ -0.48
VARS-225ENST00000482996 ABCD2Q9UBJ2 740 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 RPS6KA6Q9UK32 745 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 A4GNTQ9UNA3 340 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 PMF1-BGLAPU3KQ54 211 aa12.08□□□□□ -0.48
VARS-225ENST00000482996 NSD1Q96L73 2696 aaPredicted RBP12.08□□□□□ -0.48
VARS-225ENST00000482996 VSTM5A8MXK1 200 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 CD79AP11912 226 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 IFI30P13284 250 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 B4GALT1P15291 398 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 AQP2P41181 271 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 YAP1P46937 504 aaKnown RBP12.07□□□□□ -0.48
VARS-225ENST00000482996 DAP3P51398 398 aaKnown RBP12.07□□□□□ -0.48
VARS-225ENST00000482996 NUDT6P53370 316 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 CLRN1P58418 232 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 TNK1Q13470 666 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 TRAM2Q15035 370 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 RAB35Q15286 201 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 TRPM8Q7Z2W7 1104 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 CYP4Z1Q86W10 505 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 WDFY1Q8IWB7 410 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 FBXO17Q96EF6 278 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 SMR3AQ99954 134 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 DENND2DQ9H6A0 471 aaPredicted RBP12.07□□□□□ -0.48
VARS-225ENST00000482996 C20orf141Q9NUB4 165 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 ADA2Q9NZK5 511 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 GDF2Q9UK05 429 aaPredicted RBP12.07□□□□□ -0.48
VARS-225ENST00000482996 NAV3Q8IVL0 2385 aa12.07□□□□□ -0.48
VARS-225ENST00000482996 HIVEP2P31629 2446 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 CENPBD1B2RD01 187 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 H7C417 338 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 PIP5K1CO60331 668 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 NDUFS7O75251 213 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 UBL3O95164 117 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 RAB36O95755 333 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 HLA-HP01893 362 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 F13BP05160 661 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 HEXAP06865 529 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 CELA3BP08861 270 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 PGA4P0DJD7 388 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 PGA3P0DJD8 388 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 NCK1P16333 377 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 ACVR1BP36896 505 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 GSG1Q2KHT4 349 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 PIWIL3Q7Z3Z3 882 aaKnown RBP12.06□□□□□ -0.48
VARS-225ENST00000482996 BPIFA2Q96DR5 249 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 SEC61A2Q9H9S3 476 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 CA10Q9NS85 328 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 B3GNT2Q9NY97 397 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 FBXL3Q9UKT7 428 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 SNX13Q9Y5W8 968 aa12.06□□□□□ -0.48
VARS-225ENST00000482996 IGHV2OR16-5A0A0B4J2B6 119 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 ZNF503-AS2A6NEH8 195 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 NPIPB13A6NJU9 1138 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 NPIPB4C9JG80 1138 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 J3KTA2 159 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 DHHO43323 396 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 SSX4O60224 188 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 PDE5AO76074 875 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 FARS2O95363 451 aaKnown RBP12.05□□□□□ -0.48
VARS-225ENST00000482996 LY6G6DO95868 133 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 QDPRP09417 244 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 SAGP10523 405 aaPredicted RBP12.05□□□□□ -0.48
VARS-225ENST00000482996 NR2C1P13056 603 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 CALCRP30988 508 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 SERPINF1P36955 418 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 ZNF84P51523 738 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 DSCR9P59020 149 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 SNRPD2P62316 118 aaKnown RBP12.05□□□□□ -0.48
VARS-225ENST00000482996 PIGFQ07326 219 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 TAF11Q15544 211 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 ALG10Q5BKT4 473 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 GLYATQ6IB77 296 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 LRFN4Q6PJG9 635 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 VHLLQ6RSH7 139 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 ZNF730Q6ZMV8 503 aa12.05□□□□□ -0.48
VARS-225ENST00000482996 Q71RC1 249 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms