RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 ZIM3Q96PE6 472 aa5.34□□□□□ -1.55
CBX3-206ENST00000481057 CITED1Q99966 193 aa5.34□□□□□ -1.55
CBX3-206ENST00000481057 ZNF717Q9BY31 904 aaPredicted RBP5.34□□□□□ -1.55
CBX3-206ENST00000481057 ABCG8Q9H221 673 aa5.34□□□□□ -1.55
CBX3-206ENST00000481057 CDC42EP4Q9H3Q1 356 aaKnown RBP5.34□□□□□ -1.55
CBX3-206ENST00000481057 ZDHHC11Q9H8X9 412 aa5.34□□□□□ -1.55
CBX3-206ENST00000481057 CAB39LQ9H9S4 337 aa5.34□□□□□ -1.55
CBX3-206ENST00000481057 TMBIM4Q9HC24 238 aa5.34□□□□□ -1.55
CBX3-206ENST00000481057 S100A14Q9HCY8 104 aa5.34□□□□□ -1.55
CBX3-206ENST00000481057 SCRT2Q9NQ03 307 aa5.34□□□□□ -1.55
CBX3-206ENST00000481057 DDIT4Q9NX09 232 aa5.34□□□□□ -1.55
CBX3-206ENST00000481057 SPHK1Q9NYA1 384 aa5.34□□□□□ -1.55
CBX3-206ENST00000481057 STX18Q9P2W9 335 aaKnown RBP5.34□□□□□ -1.55
CBX3-206ENST00000481057 DAPK2Q9UIK4 370 aa5.34□□□□□ -1.55
CBX3-206ENST00000481057 SNX10Q9Y5X0 201 aa5.34□□□□□ -1.55
CBX3-206ENST00000481057 U3KQK5 164 aa5.34□□□□□ -1.55
CBX3-206ENST00000481057 CCDC160A6NGH7 325 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 PCP4L1A6NKN8 68 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 FAM166BA8MTA8 275 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 NDUFS8O00217 210 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 CDH16O75309 829 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 DCTN3O75935 186 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 EPPINO95925 133 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 IGHG3P01860 377 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 TFPTP0C1Z6 253 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 GNB3P16520 340 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 RAB4AP20338 218 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 PRDX3P30048 256 aaKnown RBP5.33□□□□□ -1.56
CBX3-206ENST00000481057 PCGF2P35227 344 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 GABRA4P48169 554 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 CYB561P49447 251 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 EMP2P54851 167 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 DOC2AQ14183 400 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 CA9Q16790 459 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 TRIM16LQ309B1 348 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 GTDC1Q4AE62 458 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 AARDQ4LEZ3 155 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 DEFB121Q5J5C9 76 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 BRMS1LQ5PSV4 323 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 PRMT9Q6P2P2 845 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 WASH2PQ6VEQ5 465 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 ADAMTSL5Q6ZMM2 481 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 C11orf57Q6ZUT1 292 aaPredicted RBP5.33□□□□□ -1.56
CBX3-206ENST00000481057 SLC16A9Q7RTY1 509 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 NUDT13Q86X67 352 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 ASCC1Q8N9N2 400 aaKnown RBP5.33□□□□□ -1.56
CBX3-206ENST00000481057 IPMKQ8NFU5 416 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 KCTD4Q8WVF5 259 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 ASZ1Q8WWH4 475 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 TAF15Q92804 592 aaKnown RBP eCLIP5.33□□□□□ -1.56
CBX3-206ENST00000481057 ECHDC3Q96DC8 303 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 TRIM62Q9BVG3 475 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 NUP85Q9BW27 656 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 TDRD1Q9BXT4 1180 aaKnown RBP5.33□□□□□ -1.56
CBX3-206ENST00000481057 PITPNM3Q9BZ71 974 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 POLR1EQ9GZS1 481 aaKnown RBP5.33□□□□□ -1.56
CBX3-206ENST00000481057 C20orf96Q9NUD7 363 aaPredicted RBP5.33□□□□□ -1.56
CBX3-206ENST00000481057 LHX3Q9UBR4 397 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 ERVK-19Q9WJR5 959 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 ARL2BPQ9Y2Y0 163 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 PPIAL4AQ9Y536 164 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 SAR1BQ9Y6B6 198 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 FREM3P0C091 2139 aa5.33□□□□□ -1.56
CBX3-206ENST00000481057 ZNF98A6NK75 572 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 K7EPI3 171 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 WRBO00258 174 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 TRAFD1O14545 582 aaPredicted RBP5.32□□□□□ -1.56
CBX3-206ENST00000481057 TOR1AO14656 332 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 IGHV2-70P01814 119 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 SMIM18P0DKX4 95 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 LHCGRP22888 699 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 CA6P23280 308 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 MNDAP41218 407 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 WNT5AP41221 380 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 NPY2RP49146 381 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 CDK9P50750 372 aaKnown RBP5.32□□□□□ -1.56
CBX3-206ENST00000481057 MAPK12P53778 367 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 KCNJ10P78508 379 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 ZNF415Q09FC8 603 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 MED21Q13503 144 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 PIGHQ14442 188 aaPredicted RBP5.32□□□□□ -1.56
CBX3-206ENST00000481057 FASTKD3Q14CZ7 662 aaKnown RBP5.32□□□□□ -1.56
CBX3-206ENST00000481057 TRADDQ15628 312 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 CAMK4Q16566 473 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 TNFAIP8L3Q5GJ75 292 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 BEX5Q5H9J7 111 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 TEX30Q5JUR7 227 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 HES5Q5TA89 166 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 DUPD1Q68J44 220 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 MFSD12Q6NUT3 480 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 ADAM5Q6NVV9 412 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 GSG1LQ6UXU4 331 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 ASPGQ86U10 573 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 LACC1Q8IV20 430 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 CLEC4FQ8N1N0 589 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 FBXW8Q8N3Y1 598 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.32□□□□□ -1.56
CBX3-206ENST00000481057 LPCAT1Q8NF37 534 aa5.32□□□□□ -1.56
CBX3-206ENST00000481057 VANGL1Q8TAA9 524 aaPredicted RBP5.32□□□□□ -1.56
CBX3-206ENST00000481057 MCOLN3Q8TDD5 553 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms