RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 KLF4O43474 513 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 PTP4A3O75365 173 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 KRT33AO76009 404 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 BCL10O95999 233 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 ADAP00813 363 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 IGFBP1P08833 259 aaPredicted RBP7.98□□□□□ -1.13
VCP-206ENST00000480327 CD8BP10966 210 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 ZNF26P17031 533 aaPredicted RBP7.98□□□□□ -1.13
VCP-206ENST00000480327 LOXP28300 417 aaPredicted RBP7.98□□□□□ -1.13
VCP-206ENST00000480327 OR3A2P47893 321 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 GSSP48637 474 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 SLC9A3P48764 834 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 CTXN1P60606 82 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 ERVK-25P63136 954 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 FAM27E3Q08E93 113 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 ZP4Q12836 540 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 FAPQ12884 760 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 CAMK2DQ13557 499 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 FHL1Q13642 323 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 TSC22D1Q15714 1073 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 TSPO2Q5TGU0 170 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 FBXW10Q5XX13 1052 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 ZNF770Q6IQ21 691 aaPredicted RBP7.98□□□□□ -1.13
VCP-206ENST00000480327 C1orf94Q6P1W5 598 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 THSD4Q6ZMP0 1018 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 C22orf34Q6ZV56 151 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 SLC35D2Q76EJ3 337 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 PXKQ7Z7A4 578 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 STK32CQ86UX6 486 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 ICA1LQ8NDH6 482 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 FANK1Q8TC84 345 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 STMN2Q93045 179 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 TMEM45BQ96B21 275 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 LRRC46Q96FV0 321 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 OR2M2Q96R28 347 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 FEVQ99581 238 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 NIPSNAP1Q9BPW8 284 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 BDH2Q9BUT1 245 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 EGLN3Q9H6Z9 239 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 S100A14Q9HCY8 104 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 PARPBPQ9NWS1 579 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 UPB1Q9UBR1 384 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 ZNF346Q9UL40 294 aaKnown RBP7.98□□□□□ -1.13
VCP-206ENST00000480327 EDARQ9UNE0 448 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 SIGLEC7Q9Y286 467 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 HIF3AQ9Y2N7 669 aa7.98□□□□□ -1.13
VCP-206ENST00000480327 LOC102725191A0A1B0GVB3 256 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 SAC3D1A6NKF1 404 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 H7C1Q1 480 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 M0R3G1 203 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 AKAP8O43823 692 aaKnown RBP7.97□□□□□ -1.13
VCP-206ENST00000480327 SLC43A1O75387 559 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 UPK3AO75631 287 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 LYZL6O75951 148 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 NDUFB2O95178 105 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 GOSR1O95249 250 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 SOX14O95416 240 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 BAG2O95816 211 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 TSPAN19P0C672 248 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 FCGR1AP12314 374 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 ZNF23P17027 643 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 CDH2P19022 906 aaPredicted RBP7.97□□□□□ -1.13
VCP-206ENST00000480327 FPR3P25089 353 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 CCKARP32238 428 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 ARHGDIAP52565 204 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 FOXG1P55316 489 aaPredicted RBP7.97□□□□□ -1.13
VCP-206ENST00000480327 FXYD6P3P58550 94 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 PRPS1P60891 318 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 RPS4XP62701 263 aaKnown RBP7.97□□□□□ -1.13
VCP-206ENST00000480327 MYBPC1Q00872 1141 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 TSPAN31Q12999 210 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 ACKR1Q16570 336 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 Q5PR19 223 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 PHYHD1Q5SRE7 291 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 SHEQ5VZ18 495 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 ZFP1Q6P2D0 407 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 SHQ1Q6PI26 577 aaKnown RBP7.97□□□□□ -1.13
VCP-206ENST00000480327 NHLRC1Q6VVB1 395 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 BEND4Q6ZU67 534 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 C10orf67Q8IYJ2 551 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 LINC00471Q8N535 108 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 LRRC75AQ8NAA5 344 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 OR5K1Q8NHB7 308 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 IGFBPL1Q8WX77 278 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 SAMD8Q96LT4 415 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 WFIKKN1Q96NZ8 548 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 ALKBH3Q96Q83 286 aaPredicted RBP7.97□□□□□ -1.13
VCP-206ENST00000480327 HS3ST6Q96QI5 342 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 KATNB1Q9BVA0 655 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 SLCO5A1Q9H2Y9 848 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 OR52D1Q9H346 318 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 SLC7A10Q9NS82 523 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 MGAT4BQ9UQ53 548 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 ADAM18Q9Y3Q7 739 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 SONP18583 2426 aaKnown RBP7.97□□□□□ -1.13
VCP-206ENST00000480327 USF3Q68DE3 2245 aa7.97□□□□□ -1.13
VCP-206ENST00000480327 ALPK2Q86TB3 2170 aa7.96□□□□□ -1.14
VCP-206ENST00000480327 HIVEP2P31629 2446 aa7.96□□□□□ -1.14
VCP-206ENST00000480327 TRIM64A6NGJ6 449 aa7.96□□□□□ -1.14
VCP-206ENST00000480327 TRIM64BA6NI03 449 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms