RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 MLIPQ5VWP3 458 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 CCDC73Q6ZRK6 1079 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 C1orf186Q6ZWK4 172 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 CENPSQ8N2Z9 138 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 RFESDQ8TAC1 157 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 GTSF1Q8WW33 167 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 SLC13A3Q8WWT9 602 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 OR1E3Q8WZA6 343 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 NUS1Q96E22 293 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 C9orf72Q96LT7 481 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 C16orf45Q96MC5 204 aaPredicted RBP3.69□□□□□ -1.82
CCDC171-207ENST00000478913 C9orf85Q96MD7 179 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 NSMCE2Q96MF7 247 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 TGM7Q96PF1 710 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 RSPO3Q9BXY4 272 aaPredicted RBP3.69□□□□□ -1.82
CCDC171-207ENST00000478913 XPO4Q9C0E2 1151 aaKnown RBP3.69□□□□□ -1.82
CCDC171-207ENST00000478913 PURGQ9UJV8 347 aaKnown RBP3.69□□□□□ -1.82
CCDC171-207ENST00000478913 FKBP7Q9Y680 259 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 LRIT2A6NDA9 550 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 CFAP73A6NFT4 308 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 ERICH4A6NGS2 130 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 C11orf98E9PRG8 122 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 PIRO00625 290 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 TYROBPO43914 113 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 CDC40O60508 579 aaKnown RBP eCLIP3.68□□□□□ -1.82
CCDC171-207ENST00000478913 KLF7O75840 302 aaPredicted RBP3.68□□□□□ -1.82
CCDC171-207ENST00000478913 PGAM2P15259 253 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 AK4P27144 223 aaPredicted RBP3.68□□□□□ -1.82
CCDC171-207ENST00000478913 SLC6A8P48029 635 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 GTF2A1P52655 376 aaPredicted RBP3.68□□□□□ -1.82
CCDC171-207ENST00000478913 KRTAP10-3P60369 221 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 MYBPC1Q00872 1141 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 WASHC5Q12768 1159 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 EIF2B1Q14232 305 aaKnown RBP3.68□□□□□ -1.82
CCDC171-207ENST00000478913 MESDQ14696 234 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 NCF4Q15080 339 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 ZNF699Q32M78 642 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 C10orf120Q5SQS8 335 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 UTF1Q5T230 341 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 IL23RQ5VWK5 629 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 OLFML2AQ68BL7 652 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 ATL3Q6DD88 541 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 WDR88Q6ZMY6 472 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 DNM1P46Q6ZS02 220 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 GOLGA7Q7Z5G4 137 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 SVOPLQ8N434 492 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 DLX4Q92988 240 aaPredicted RBP3.68□□□□□ -1.82
CCDC171-207ENST00000478913 NDUFAF3Q9BU61 184 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 ANGPTL4Q9BY76 406 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 ZSCAN16Q9H4T2 348 aaPredicted RBP3.68□□□□□ -1.82
CCDC171-207ENST00000478913 POLD4Q9HCU8 107 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 BCAP29Q9UHQ4 241 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 HOOK1Q9UJC3 728 aaKnown RBP3.68□□□□□ -1.82
CCDC171-207ENST00000478913 GNPTGQ9UJJ9 305 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 RNF115Q9Y4L5 304 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 ALG6Q9Y672 507 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 DNAH3Q8TD57 4116 aa3.68□□□□□ -1.82
CCDC171-207ENST00000478913 TMEM110-MUSTN1A8MSY1 372 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 PDLIM1O00151 329 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 TBL1XO60907 577 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 SMC2O95347 1197 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 IGSF6O95976 241 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 CTSLP07711 333 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 ZDHHC11BP0C7U3 371 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 MCF2P10911 925 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 CYP11B1P15538 503 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 STMN1P16949 149 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 OMGP23515 440 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 EFNA3P52797 238 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 SLC25A1P53007 311 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 UBA52P62987 128 aaKnown RBP3.67□□□□□ -1.82
CCDC171-207ENST00000478913 IFT88Q13099 833 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 ZIC1Q15915 447 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 ACSF3Q4G176 576 aaPredicted RBP3.67□□□□□ -1.82
CCDC171-207ENST00000478913 GPRC6AQ5T6X5 926 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 CGB2Q6NT52 195 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 ZDHHC22Q8N966 263 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 C18orf15Q96N68 181 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 HES7Q9BYE0 225 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 CLSTN2Q9H4D0 955 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 YY1AP1Q9H869 796 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 FZR1Q9UM11 496 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 DHRS7Q9Y394 339 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 PPIAL4AQ9Y536 164 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 FADS3Q9Y5Q0 445 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 MED12Q93074 2177 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 DNAJC13O75165 2243 aa3.67□□□□□ -1.82
CCDC171-207ENST00000478913 DSCAMO60469 2012 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 MALRD1Q5VYJ5 2156 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 FAM168BA1KXE4 195 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 A8MX80 341 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 C9J4A7 227 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 NPIPA2E9PIF3 369 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 H3BMH7 237 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.66□□□□□ -1.82
CCDC171-207ENST00000478913 LCMT2O60294 686 aaKnown RBP3.66□□□□□ -1.82
CCDC171-207ENST00000478913 TSC22D2O75157 780 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 LAMP1P11279 417 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 CCNB1P14635 433 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 SYT1P21579 422 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms