RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 ADPRHL1Q8NDY3 354 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 FGFBP3Q8TAT2 258 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 ZNF519Q8TB69 540 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 ST7LQ8TDW4 575 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 SLC38A5Q8WUX1 472 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 TEX37Q96LM6 180 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 C1orf147Q96MC9 270 aaPredicted RBP14.59□□□□□ -0.07
VIM-204ENST00000478746 OR52E6Q96RD3 313 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 PARD6BQ9BYG5 372 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 OR51B6Q9H340 312 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 SAP30LQ9HAJ7 183 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 C12orf10Q9HB07 376 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 PLEK2Q9NYT0 353 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 IFT52Q9Y366 437 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 PPIAL4EA0A075B759 164 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 PPIAL4CA0A0B4J2A2 164 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 A0A0G2JPF8 293 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 HNRNPCL2B2RXH8 293 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 HNRNPCL3B7ZW38 293 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 PPIAL4DF5H284 164 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 ITM2AO43736 263 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 HNRNPCL1O60812 293 aaKnown RBP14.58□□□□□ -0.08
VIM-204ENST00000478746 MT-ND5P03915 603 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 MYZAPP0CAP1 466 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 HNRNPCL4P0DMR1 293 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 PPIAL4FP0DN26 164 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 ETFAP13804 333 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 LBPP18428 481 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 CRATP43155 626 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 ATP4BP51164 291 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 UFM1P61960 85 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 LRRC74AQ0VAA2 488 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 RPS26P11Q5JNZ5 115 aaPredicted RBP14.58□□□□□ -0.08
VIM-204ENST00000478746 C6orf89Q6UWU4 347 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 BCL6BQ8N143 479 aaPredicted RBP14.58□□□□□ -0.08
VIM-204ENST00000478746 PAQR4Q8N4S7 273 aaPredicted RBP14.58□□□□□ -0.08
VIM-204ENST00000478746 ZNF781Q8N8C0 355 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 GLB1L3Q8NCI6 653 aaPredicted RBP14.58□□□□□ -0.08
VIM-204ENST00000478746 SLC30A7Q8NEW0 376 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 CCL17Q92583 94 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 ELMOD3Q96FG2 381 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 CDH20Q9HBT6 801 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 UBAP1Q9NZ09 502 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 ARMCX1Q9P291 453 aa14.58□□□□□ -0.08
VIM-204ENST00000478746 A0A087WUJ7 227 aa14.57□□□□□ -0.08
VIM-204ENST00000478746 ISPDA4D126 451 aa14.57□□□□□ -0.08
VIM-204ENST00000478746 FOXH1O75593 365 aa14.57□□□□□ -0.08
VIM-204ENST00000478746 CCL2P13500 99 aa14.57□□□□□ -0.08
VIM-204ENST00000478746 DRD4P21917 467 aa14.57□□□□□ -0.08
VIM-204ENST00000478746 UCP2P55851 309 aa14.57□□□□□ -0.08
VIM-204ENST00000478746 ERVS71-1P61550 626 aa14.57□□□□□ -0.08
VIM-204ENST00000478746 LEG1Q6P5S2 330 aa14.57□□□□□ -0.08
VIM-204ENST00000478746 NHLRC1Q6VVB1 395 aa14.57□□□□□ -0.08
VIM-204ENST00000478746 NUDCD3Q8IVD9 361 aa14.57□□□□□ -0.08
VIM-204ENST00000478746 GTF3AQ92664 365 aaKnown RBP14.57□□□□□ -0.08
VIM-204ENST00000478746 TAF15Q92804 592 aaKnown RBP eCLIP14.57□□□□□ -0.08
VIM-204ENST00000478746 SLC35B4Q969S0 331 aa14.57□□□□□ -0.08
VIM-204ENST00000478746 SLC41A3Q96GZ6 507 aa14.57□□□□□ -0.08
VIM-204ENST00000478746 ASPNQ9BXN1 380 aa14.57□□□□□ -0.08
VIM-204ENST00000478746 KLHL14Q9P2G3 628 aa14.57□□□□□ -0.08
VIM-204ENST00000478746 LEF1Q9UJU2 399 aaPredicted RBP14.57□□□□□ -0.08
VIM-204ENST00000478746 AUP1Q9Y679 476 aa14.57□□□□□ -0.08
VIM-204ENST00000478746 IGKV1D-42A0A075B6H8 117 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 TMEM247A6NEH6 219 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 RFXANKO14593 260 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 OR8G3PP0DMU2 310 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 MDKP21741 143 aaPredicted RBP14.56□□□□□ -0.08
VIM-204ENST00000478746 IL12AP29459 219 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 GCH1P30793 250 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 CSNK1A1P48729 337 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 MVDP53602 400 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 DSTNP60981 165 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 PMS2P3Q13401 168 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 PDCD4Q53EL6 469 aaKnown RBP14.56□□□□□ -0.08
VIM-204ENST00000478746 SLC22A24Q8N4F4 322 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 ICA1LQ8NDH6 482 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 DEFB108BQ8NET1 73 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 TMEM19Q96HH6 336 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 ZNF48Q96MX3 618 aaPredicted RBP14.56□□□□□ -0.08
VIM-204ENST00000478746 BCL2L14Q9BZR8 327 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 RNF121Q9H920 327 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 MMP26Q9NRE1 261 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 LGALS13Q9UHV8 139 aa14.56□□□□□ -0.08
VIM-204ENST00000478746 A0A1B0GWA3 101 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 CLDN34H7C241 214 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 ENTPD5O75356 428 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 PTHP01270 115 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 MAKP20794 623 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 AHCYP23526 432 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 RPL14P50914 215 aaKnown RBP14.55□□□□□ -0.08
VIM-204ENST00000478746 ZNF81P51508 661 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 GLO1Q04760 184 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 SLC3A1Q07837 685 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 PUDPQ08623 228 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 SLC9A3R2Q15599 337 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 ALG10BQ5I7T1 473 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 KLF17Q5JT82 389 aaPredicted RBP14.55□□□□□ -0.08
VIM-204ENST00000478746 FAM209AQ5JX71 171 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 TMEM53Q6P2H8 277 aa14.55□□□□□ -0.08
VIM-204ENST00000478746 PXKQ7Z7A4 578 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms