RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 APEHP13798 732 aaKnown RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 ARSBP15848 533 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 HIST1H1CP16403 213 aaKnown RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 TYRP1P17643 537 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 TCEA1P23193 301 aaKnown RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 AHCYP23526 432 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 LCN1P31025 176 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 PYCR1P32322 319 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 RCVRNP35243 200 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 RPL4P36578 427 aaKnown RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 ACVR1BP36896 505 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 GPR3P46089 330 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 DIO1P49895 249 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 GDI2P50395 445 aaKnown RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 HSD17B7P56937 341 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 OR12D2P58182 307 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 PRPS1P60891 318 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 RRAS2P62070 204 aaPredicted RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 PPP1CAP62136 330 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 E2F1Q01094 437 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 CD83Q01151 205 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 FUT7Q11130 342 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 MRPL28Q13084 256 aaKnown RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 MAB21L1Q13394 359 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 MADCAM1Q13477 382 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 FHL1Q13642 323 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 SERTAD2Q14140 314 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 FZD2Q14332 565 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 GPR176Q14439 515 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF267Q14586 743 aaPredicted RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 PON3Q15166 354 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 DEFB110Q30KQ9 67 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 CCDC58Q4VC31 144 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 TP53I3Q53FA7 332 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 HSD17B12Q53GQ0 312 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 TCTE1Q5JU00 501 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 FCRLBQ6BAA4 426 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 UNQ9370/PRO34162Q6UXP9 181 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 NPSR1Q6W5P4 371 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 DGAT2L6Q6ZPD8 337 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 PARGQ86W56 976 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 PLCZ1Q86YW0 608 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 CARFQ8N187 725 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 BCORP1Q8N888 145 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF527Q8NB42 609 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 CYB561A3Q8NBI2 242 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 SDR9C7Q8NEX9 313 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 NLGN4YQ8NFZ3 816 aaPredicted RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 OR7G1Q8NGA0 311 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 OR4M2Q8NGB6 313 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 OR5J2Q8NH18 312 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 OR4K13Q8NH42 304 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 OR14A16Q8NHC5 309 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 LILRB4Q8NHJ6 448 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 GRPEL2Q8TAA5 225 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 ZFAND1Q8TCF1 268 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 RPS4Y2Q8TD47 263 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 HMGB4Q8WW32 186 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 AKAP1Q92667 903 aaKnown RBP eCLIP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 GHSRQ92847 366 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 UPRTQ96BW1 309 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 CLIP3Q96DZ5 547 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 SMIM19Q96E16 107 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 ZMYND19Q96E35 227 aaPredicted RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 RNF31Q96EP0 1072 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 TOE1Q96GM8 510 aaKnown RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 PEX11GQ96HA9 241 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF285Q96NJ3 590 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 GPX7Q96SL4 187 aaPredicted RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 TMEM246Q9BRR3 403 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 THAP7Q9BT49 309 aaPredicted RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 MRI1Q9BV20 369 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 GTPBP2Q9BX10 602 aaKnown RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 GON7Q9BXV9 100 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 CHRNA10Q9GZZ6 450 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 OR10A5Q9H207 317 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 DPAGT1Q9H3H5 408 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 MS4A5Q9H3V2 200 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 C12orf10Q9HB07 376 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 RANGRFQ9HD47 186 aaPredicted RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 EXOSC3Q9NQT5 275 aaKnown RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 KLHL1Q9NR64 748 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 STARD5Q9NSY2 213 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 MRPL39Q9NYK5 338 aaKnown RBP4.49□□□□□ -1.69
SF3B6-202ENST00000478050 HCN3Q9P1Z3 774 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 COPZ2Q9P299 210 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 NLKQ9UBE8 527 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 PLCL2Q9UPR0 1127 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 MOKQ9UQ07 419 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 ERVK-19Q9WJR5 959 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 OR10H1Q9Y4A9 318 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 IER3IP1Q9Y5U9 82 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 NUBP2Q9Y5Y2 271 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 CACNG2Q9Y698 323 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 CLCA3PQ9Y6N3 262 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 FRYQ5TBA9 3013 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 CPAMD8Q8IZJ3 1885 aa4.49□□□□□ -1.69
SF3B6-202ENST00000478050 PTPRQQ9UMZ3 2332 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms