RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 GATA2P23769 480 aaPredicted RBP3.69□□□□□ -1.82
VPS50-214ENST00000477935 BTG2P78543 158 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 DLK1P80370 383 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 MS4A2Q01362 244 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 MZT1Q08AG7 82 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 FUT7Q11130 342 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 DPYSL3Q14195 570 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 GGTLC2Q14390 218 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 OPCMLQ14982 345 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 TMED2Q15363 201 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 ZNF791Q3KP31 576 aaPredicted RBP3.69□□□□□ -1.82
VPS50-214ENST00000477935 ANKRD20A4Q4UJ75 823 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 TCP11X2Q5H9J9 407 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 ANKRD20A2Q5SQ80 823 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 NCMAPQ5T1S8 102 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 ANKRD20A1Q5TYW2 823 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 ANKRD20A3Q5VUR7 823 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 CHMP1BQ7LBR1 199 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 PRSS41Q7RTY9 318 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 P4HA3Q7Z4N8 544 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 ADCK2Q7Z695 626 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 ASPGQ86U10 573 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 PIANPQ8IYJ0 282 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 ZNF525Q8N782 197 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 SNX31Q8N9S9 440 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 OR5T2Q8NGG2 359 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 C11orf45Q8TAV5 145 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 KCTD4Q8WVF5 259 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 SLC13A3Q8WWT9 602 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 DTNBP1Q96EV8 351 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 ZNF597Q96LX8 424 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 JSRP1Q96MG2 331 aaPredicted RBP3.69□□□□□ -1.82
VPS50-214ENST00000477935 BTBD9Q96Q07 612 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 VAT1Q99536 393 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 BAG1Q99933 345 aaPredicted RBP3.69□□□□□ -1.82
VPS50-214ENST00000477935 CACNG6Q9BXT2 260 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 HOXD1Q9GZZ0 328 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 OPN3Q9H1Y3 402 aaPredicted RBP3.69□□□□□ -1.82
VPS50-214ENST00000477935 UBQLN3Q9H347 655 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 LIN28AQ9H9Z2 209 aaKnown RBP3.69□□□□□ -1.82
VPS50-214ENST00000477935 NTN4Q9HB63 628 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 MYOZ1Q9NP98 299 aaPredicted RBP3.69□□□□□ -1.82
VPS50-214ENST00000477935 B3GAT2Q9NPZ5 323 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 RPS10P5Q9NQ39 176 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 CBLN4Q9NTU7 201 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 DDX28Q9NUL7 540 aaKnown RBP3.69□□□□□ -1.82
VPS50-214ENST00000477935 ZNHIT6Q9NWK9 470 aaKnown RBP3.69□□□□□ -1.82
VPS50-214ENST00000477935 CLCF1Q9UBD9 225 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 CIDEBQ9UHD4 219 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 RUVBL2Q9Y230 463 aaKnown RBP3.69□□□□□ -1.82
VPS50-214ENST00000477935 SLC6A5Q9Y345 797 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 WIPI2Q9Y4P8 454 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 HYDINQ4G0P3 5121 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 RYR2Q92736 4967 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 KIAA1549Q9HCM3 1950 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 FREM3P0C091 2139 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 LOC105371242A0A075B767 164 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 LOC390937A0A1W2PQ73 354 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 SYCE3A1L190 88 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 ZNF487B1APH4 448 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 TP53I11O14683 189 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 ANXA9O76027 345 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 RNH1P13489 461 aaKnown RBP3.68□□□□□ -1.82
VPS50-214ENST00000477935 TPSB2P20231 275 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 TLX1P31314 330 aaPredicted RBP3.68□□□□□ -1.82
VPS50-214ENST00000477935 CCR7P32248 378 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 ZNF41P51814 821 aaPredicted RBP3.68□□□□□ -1.82
VPS50-214ENST00000477935 NAGLUP54802 743 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 HSD17B7P56937 341 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 POLR2FP61218 127 aaKnown RBP3.68□□□□□ -1.82
VPS50-214ENST00000477935 RPP38P78345 283 aaKnown RBP3.68□□□□□ -1.82
VPS50-214ENST00000477935 SLC25A11Q02978 314 aaKnown RBP3.68□□□□□ -1.82
VPS50-214ENST00000477935 ILF2Q12905 390 aaKnown RBP3.68□□□□□ -1.82
VPS50-214ENST00000477935 SRSF9Q13242 221 aaKnown RBP eCLIP3.68□□□□□ -1.82
VPS50-214ENST00000477935 TPSAB1Q15661 275 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 BCL2A1Q16548 175 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 IQCCQ4KMZ1 466 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 CAPN13Q6MZZ7 669 aaPredicted RBP3.68□□□□□ -1.82
VPS50-214ENST00000477935 SHQ1Q6PI26 577 aaKnown RBP3.68□□□□□ -1.82
VPS50-214ENST00000477935 PPP1R21Q6ZMI0 780 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 STAC2Q6ZMT1 411 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 VN1R4Q7Z5H5 301 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 KIAA1328Q86T90 577 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 P2RY8Q86VZ1 359 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 PQLC3Q8N755 202 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 STEAP2Q8NFT2 490 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 IPMKQ8NFU5 416 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 OR5T3Q8NGG3 340 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 OR13C4Q8NGS5 318 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 OR9A1PQ8NGU1 263 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 NUBPLQ8TB37 319 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 RAB3IL1Q8TBN0 382 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 MIPOL1Q8TD10 442 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 SKA2Q8WVK7 121 aaPredicted RBP3.68□□□□□ -1.82
VPS50-214ENST00000477935 LRRC45Q96CN5 670 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 CNRIP1Q96F85 164 aaPredicted RBP3.68□□□□□ -1.82
VPS50-214ENST00000477935 CDKN2AIPNLQ96HQ2 116 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 PRAP1Q96NZ9 151 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 ALS2CR12Q96Q35 445 aa3.68□□□□□ -1.82
VPS50-214ENST00000477935 FERMT1Q9BQL6 677 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms