RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 HEPACAMQ14CZ8 416 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 C12orf73Q69YU5 71 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 SFRP4Q6FHJ7 346 aaPredicted RBP11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 HEPN1Q6WQI6 88 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 PARS2Q7L3T8 475 aaKnown RBP11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 GOLGA7Q7Z5G4 137 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 OR9A4Q8NGU2 314 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 NUBPLQ8TB37 319 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 UBTD2Q8WUN7 234 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 METTL21AQ8WXB1 218 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 ESAMQ96AP7 390 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 ZNF75AQ96N20 296 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 WDR13Q9H1Z4 485 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 RHOFQ9HBH0 211 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 APOBEC3BQ9UH17 382 aaKnown RBP11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 TNFSF18Q9UNG2 199 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 SLC16A5O15375 505 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 MAGEB4O15481 346 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 TGOLN2O43493 480 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 CD8AP01732 235 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 BCHEP06276 602 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 TMIGD3P0DMS9 266 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 HMGA2P52926 109 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 RAB40BQ12829 278 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 SCARB2Q14108 478 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 ELAVL1Q15717 326 aaKnown RBP11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 AKR1C8PQ5T2L2 129 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 SERPINA13PQ6UXR4 307 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 TMEM184AQ6ZMB5 413 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 FAM24BQ8N5W8 94 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 NUDCD2Q8WVJ2 157 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 SKA2Q8WVK7 121 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 EXTL1Q92935 676 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 SAT2Q96F10 170 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 FAM71F1Q96KD3 344 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 FCRL4Q96PJ5 515 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 CNN2Q99439 309 aaKnown RBP11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 IPPKQ9H8X2 491 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 THSD1Q9NS62 852 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 GPR173Q9NS66 373 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 SLC6A13Q9NSD5 602 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 GNG8Q9UK08 70 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 ATG2AQ2TAZ0 1938 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 PLXNA2O75051 1894 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 SIAH2O43255 324 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 NDUFB6O95139 128 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 KCNK5O95279 499 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 RLN1P04808 185 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 SERPIND1P05546 499 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 PRDX3P30048 256 aaKnown RBP11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 DHPSP49366 369 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 EFNB1P98172 346 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 SPIBQ01892 262 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 NAAAQ02083 359 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 POM121L1PQ3SYA9 428 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 TANGO2Q6ICL3 276 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 ACOT7LQ6ZUV0 252 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 TIPARPQ7Z3E1 657 aaKnown RBP11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 FAM26EQ8N5C1 309 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 ZNF610Q8N9Z0 462 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 OR13D1Q8NGV5 346 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 PAQR8Q8TEZ7 354 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 THAP4Q8WY91 577 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 SUSD6Q92537 303 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 RSC1A1Q92681 617 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 GLYATL1Q969I3 302 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 PACRGQ96M98 296 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 HSPA12BQ96MM6 686 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 PCGF1Q9BSM1 259 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 SLC12A9Q9BXP2 914 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 BHLHE41Q9C0J9 482 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 MEPEQ9NQ76 525 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 ARL15Q9NXU5 204 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 PPT2Q9UMR5 302 aa11.58□□□□□ -0.56
RTFDC1-207ENST00000477573 E7EQ34 232 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 C1QTNF3-AMACRE9PGA6 284 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 GOSR2O14653 212 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 TAPBPO15533 448 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 TCF21O43680 179 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 STK16O75716 305 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 PIAS2O75928 621 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 CD74P04233 296 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 EPB42P16452 691 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 GPX2P18283 190 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 TBPP20226 339 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 FCARP24071 287 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 MAPK9P45984 424 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 LIMS1P48059 325 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 ERVPABLB-1P60509 514 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 ERVFC1-1P60608 527 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 RUNX3Q13761 415 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 ZNF234Q14588 700 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 GAB4Q2WGN9 574 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 RFTN2Q52LD8 501 aaPredicted RBP11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 AWAT1Q58HT5 328 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 GLT8D1Q68CQ7 371 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 FIGNL1Q6PIW4 674 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 DOK6Q6PKX4 331 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 POGLUT1Q8NBL1 392 aa11.57□□□□□ -0.56
RTFDC1-207ENST00000477573 OR52B6Q8NGF0 335 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms