RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 GIPC3Q8TF64 312 aa11.55□□□□□ -0.56
TOP3A-205ENST00000477508 ASB10Q8WXI3 467 aa11.55□□□□□ -0.56
TOP3A-205ENST00000477508 TMEM54Q969K7 222 aa11.55□□□□□ -0.56
TOP3A-205ENST00000477508 NRBF2Q96F24 287 aa11.55□□□□□ -0.56
TOP3A-205ENST00000477508 ALKBH3Q96Q83 286 aaPredicted RBP11.55□□□□□ -0.56
TOP3A-205ENST00000477508 GPX7Q96SL4 187 aaPredicted RBP11.55□□□□□ -0.56
TOP3A-205ENST00000477508 BDH2Q9BUT1 245 aa11.55□□□□□ -0.56
TOP3A-205ENST00000477508 DGCR6LQ9BY27 220 aa11.55□□□□□ -0.56
TOP3A-205ENST00000477508 ULBP2Q9BZM5 246 aa11.55□□□□□ -0.56
TOP3A-205ENST00000477508 CRLF2Q9HC73 371 aa11.55□□□□□ -0.56
TOP3A-205ENST00000477508 GPR35Q9HC97 309 aa11.55□□□□□ -0.56
TOP3A-205ENST00000477508 MOV10Q9HCE1 1003 aaKnown RBP11.55□□□□□ -0.56
TOP3A-205ENST00000477508 OBP2BQ9NPH6 170 aa11.55□□□□□ -0.56
TOP3A-205ENST00000477508 GLTPQ9NZD2 209 aa11.55□□□□□ -0.56
TOP3A-205ENST00000477508 GRHPRQ9UBQ7 328 aa11.55□□□□□ -0.56
TOP3A-205ENST00000477508 U3KQV3 271 aa11.55□□□□□ -0.56
TOP3A-205ENST00000477508 UNC79Q9P2D8 2635 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 M0R3G1 203 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 MGRN1O60291 552 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 PGA4P0DJD7 388 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 PGA3P0DJD8 388 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 CRYGSP22914 178 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 FASP25445 335 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 SLC6A6P31641 620 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 ERFP50548 548 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 CLRN1P58418 232 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 SNTB1Q13884 538 aaKnown RBP11.54□□□□□ -0.56
TOP3A-205ENST00000477508 MELKQ14680 651 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 RFX4Q33E94 735 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 CARD17Q5XLA6 110 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 HIST2H2BCQ6DN03 193 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 ANKRD16Q6P6B7 361 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 KLHL24Q6TFL4 600 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 CCDC36Q8IYA8 594 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 ARIH2OSQ8N7S6 290 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 AQP11Q8NBQ7 271 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 OR10G2Q8NGC3 310 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 MAGEE2Q8TD90 523 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-205ENST00000477508 GPA33Q99795 319 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 ALG12Q9BV10 488 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 KATNB1Q9BVA0 655 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 POLDIP3Q9BY77 421 aaKnown RBP11.54□□□□□ -0.56
TOP3A-205ENST00000477508 MRPL13Q9BYD1 178 aaKnown RBP11.54□□□□□ -0.56
TOP3A-205ENST00000477508 SMURF2Q9HAU4 748 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 VNN3Q9NY84 501 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 POFUT2Q9Y2G5 429 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 AMDHD2Q9Y303 409 aa11.54□□□□□ -0.56
TOP3A-205ENST00000477508 MAGED1Q9Y5V3 778 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-205ENST00000477508 CELSR2Q9HCU4 2923 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 A6NNC1 897 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 ZNF99A8MXY4 864 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-205ENST00000477508 XKRYO14609 159 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 IMPA2O14732 288 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 IDH3BO43837 385 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 TRMUO75648 421 aaKnown RBP11.53□□□□□ -0.56
TOP3A-205ENST00000477508 TIPRLO75663 272 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 RAD51DO75771 328 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 GASTP01350 101 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 RPS6KA3P51812 740 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 NR1H2P55055 460 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 TLE4Q04727 773 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 LGALS3BPQ08380 585 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 PPA1Q15181 289 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 TSC22D1Q15714 1073 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 TAB1Q15750 504 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 ATP6AP1Q15904 470 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 ZSCAN26Q16670 478 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 HIST3H3Q16695 136 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 CEACAM16Q2WEN9 425 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 THEM4Q5T1C6 240 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 CD300LDQ6UXZ3 194 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 RASSF6Q6ZTQ3 369 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 ZNF627Q7L945 461 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 ZNF295-AS1Q8N0V1 137 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 CLDN22Q8N7P3 220 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 NOXO1Q8NFA2 376 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 OR9Q2Q8NGE9 314 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 OR1K1Q8NGR3 316 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 FANK1Q8TC84 345 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 DNAJC9Q8WXX5 260 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 RBP7Q96R05 134 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 ZNF556Q9HAH1 456 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 NRIP3Q9NQ35 241 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 IL20Q9NYY1 176 aa11.53□□□□□ -0.56
TOP3A-205ENST00000477508 ZNF346Q9UL40 294 aaKnown RBP11.53□□□□□ -0.56
TOP3A-205ENST00000477508 FAM221AA4D161 298 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 ARPC3O15145 178 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 CTAG2O75638 210 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 WNT11O96014 354 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 THBDP07204 575 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 QDPRP09417 244 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 ANXA8P13928 327 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 ZNF26P17031 533 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-205ENST00000477508 CDH2P19022 906 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-205ENST00000477508 SDHAP31040 664 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 ACVR1BP36896 505 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 ZNF84P51523 738 aa11.52□□□□□ -0.57
TOP3A-205ENST00000477508 ZNF133P52736 654 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-205ENST00000477508 FOXG1P55316 489 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-205ENST00000477508 UBE2NP61088 152 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms