RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 KLF11O14901 512 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 SLC22A3O75751 556 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 ZCCHC18P0CG32 403 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 DAOP14920 347 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 GIFP27352 417 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 CAPZA2P47755 286 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 EVX1P49640 407 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 GALK2Q01415 458 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 ROR2Q01974 943 aaKnown RBP6.29□□□□□ -1.4
BRCA1-214ENST00000477152 FUT5Q11128 374 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 TRMT5Q32P41 509 aaKnown RBP6.29□□□□□ -1.4
BRCA1-214ENST00000477152 HIKESHIQ53FT3 197 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF311Q5JNZ3 666 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 SPATA21Q7Z572 469 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 GLB1L2Q8IW92 636 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 BBS10Q8TAM1 723 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 DNAJA4Q8WW22 397 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-214ENST00000477152 HTRA1Q92743 480 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 BCL2L2Q92843 193 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF524Q96C55 264 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 SLC25A36Q96CQ1 311 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 ZG16BQ96DA0 208 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 FOXN4Q96NZ1 517 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 SORCS2Q96PQ0 1159 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 PAIP2Q9BPZ3 127 aaKnown RBP6.29□□□□□ -1.4
BRCA1-214ENST00000477152 CENPHQ9H3R5 247 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF443Q9Y2A4 671 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-214ENST00000477152 CLDN24A6NM45 220 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 HDAC3O15379 428 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 FRS3O43559 492 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 ITM2AO43736 263 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 STAMBPO95630 424 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 LGI1O95970 557 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 BCHEP06276 602 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 ANPEPP15144 967 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 PPIBP23284 216 aaKnown RBP6.29□□□□□ -1.4
BRCA1-214ENST00000477152 IGFBP5P24593 272 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 CLDN17P56750 224 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 UFM1P61960 85 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 POU3F1Q03052 451 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-214ENST00000477152 FADDQ13158 208 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 TOP3AQ13472 1001 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-214ENST00000477152 DAG1Q14118 895 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 MMEL1Q495T6 779 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 SLC9B1Q4ZJI4 515 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF836Q6ZNA1 936 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 OLIG3Q7RTU3 272 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 OVCH2Q7RTZ1 564 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 GLCCI1Q86VQ1 547 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF786Q8N393 782 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 MSI2Q96DH6 328 aaKnown RBP6.29□□□□□ -1.4
BRCA1-214ENST00000477152 PKNOX2Q96KN3 472 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF385AQ96PM9 386 aaKnown RBP6.29□□□□□ -1.4
BRCA1-214ENST00000477152 ALKBH3Q96Q83 286 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-214ENST00000477152 ADI1Q9BV57 179 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 THAP1Q9NVV9 213 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF346Q9UL40 294 aaKnown RBP6.29□□□□□ -1.4
BRCA1-214ENST00000477152 CORO2BQ9UQ03 480 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 POFUT2Q9Y2G5 429 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 GRIP1Q9Y3R0 1128 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 PLCE1Q9P212 2302 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 COL6A5A8TX70 2615 aa6.29□□□□□ -1.4
BRCA1-214ENST00000477152 SONP18583 2426 aaKnown RBP6.29□□□□□ -1.4
BRCA1-214ENST00000477152 VPS13CQ709C8 3753 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 SLC22A23A1A5C7 686 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 PRORSD1PA6NEY8 169 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 ZNF726A6NNF4 738 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 B4DSR2 109 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 IGKV3-15P01624 115 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 IGLV1-44P01699 117 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 CECR9P0C854 216 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 GAAP10253 952 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 NQO1P15559 274 aaKnown RBP6.28□□□□□ -1.4
BRCA1-214ENST00000477152 SELENOPP49908 381 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 DVL1P1P54792 670 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-214ENST00000477152 FOXG1P55316 489 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-214ENST00000477152 NME5P56597 212 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 STX1BP61266 288 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 ADIPOQQ15848 244 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 MOGQ16653 247 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 MST1LQ2TV78 715 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 KRTAP24-1Q3LI83 254 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 C6orf10Q5SRN2 563 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 FAM69AQ5T7M9 428 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 GKAP1Q5VSY0 366 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-214ENST00000477152 WDR93Q6P2C0 686 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 SHQ1Q6PI26 577 aaKnown RBP6.28□□□□□ -1.4
BRCA1-214ENST00000477152 C12orf54Q6X4T0 127 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 H1FNTQ75WM6 255 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-214ENST00000477152 UEVLDQ8IX04 471 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 MREGQ8N565 214 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 ZIC4Q8N9L1 334 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 ADPRHL1Q8NDY3 354 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 OR6S1Q8NH40 331 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 ZFAND2BQ8WV99 257 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 CKAP2Q8WWK9 683 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 ZMYND19Q96E35 227 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-214ENST00000477152 LRR1Q96L50 414 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 BPESC1Q9GZL8 116 aa6.28□□□□□ -1.4
BRCA1-214ENST00000477152 TPT1P8Q9HAU6 139 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms