RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 TPD52L2O43399 206 aaKnown RBP9.63□□□□□ -0.87
BRCA1-213ENST00000476777 ZNF500O60304 480 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-213ENST00000476777 CCL2P13500 99 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 CBLP22681 906 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 S100A3P33764 101 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 ATP4BP51164 291 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 MVDP53602 400 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 CLNS1AP54105 237 aaKnown RBP9.63□□□□□ -0.87
BRCA1-213ENST00000476777 CAMK2DQ13557 499 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 LARS2Q15031 903 aaKnown RBP9.63□□□□□ -0.87
BRCA1-213ENST00000476777 TSTQ16762 297 aaKnown RBP9.63□□□□□ -0.87
BRCA1-213ENST00000476777 ZNF621Q6ZSS3 439 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 NET1Q7Z628 596 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-213ENST00000476777 SNX32Q86XE0 403 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 SLC30A7Q8NEW0 376 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 ZNF519Q8TB69 540 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 SLC38A5Q8WUX1 472 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 CCL17Q92583 94 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 SLC38A4Q969I6 547 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 SLC41A3Q96GZ6 507 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 TEX37Q96LM6 180 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 PANX1Q96RD7 426 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 PKP2Q99959 881 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 SPATA9Q9BWV2 254 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 ULBP2Q9BZM5 246 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 OR51B6Q9H340 312 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 UBAP1Q9NZ09 502 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 P2RX2Q9UBL9 471 aa9.63□□□□□ -0.87
BRCA1-213ENST00000476777 TRAV36DV7A0A075B6V5 113 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 A0A087WUJ7 227 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 FOXH1O75593 365 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 LCKP06239 509 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 MAKP20794 623 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 OMGP23515 440 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 CRISP3P54108 245 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 RBBP4Q09028 425 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 ZNF154Q13106 437 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 RPS26P11Q5JNZ5 115 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-213ENST00000476777 C5orf46Q6UWT4 87 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 PIWIL3Q7Z3Z3 882 aaKnown RBP9.62□□□□□ -0.87
BRCA1-213ENST00000476777 GLB1L3Q8NCI6 653 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-213ENST00000476777 OR6N1Q8NGY5 312 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 TCP10LQ8TDR4 215 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 WFDC12Q8WWY7 111 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 C11orf40Q8WZ69 217 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 TMIGD2Q96BF3 282 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 TRIM44Q96DX7 344 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-213ENST00000476777 ELMOD3Q96FG2 381 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 ARMC7Q9H6L4 198 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 C12orf10Q9HB07 376 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 CALML5Q9NZT1 146 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 KLHL14Q9P2G3 628 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 ZNF232Q9UNY5 417 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 POLR3KQ9Y2Y1 108 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-213ENST00000476777 AUP1Q9Y679 476 aa9.62□□□□□ -0.87
BRCA1-213ENST00000476777 ISPDA4D126 451 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 ZNF726A6NNF4 738 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 TRAPPC2LH3BP13 241 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 UBOX5O94941 541 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 KRT75O95678 551 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 BCHEP06276 602 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 OR8G3PP0DMU2 310 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 NQO1P15559 274 aaKnown RBP9.61□□□□□ -0.87
BRCA1-213ENST00000476777 IL12AP29459 219 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 UCP2P55851 309 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 NME5P56597 212 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 GLO1Q04760 184 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 MOGQ16653 247 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 FAM209AQ5JX71 171 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 C16orf87Q6PH81 154 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 WDR88Q6ZMY6 472 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 MIER2Q8N344 545 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 SLC22A24Q8N4F4 322 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 SCAIQ8N9R8 606 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 ST7LQ8TDW4 575 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 SLC35B4Q969S0 331 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 C16orf45Q96MC5 204 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-213ENST00000476777 MMP27Q9H306 513 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 CDH20Q9HBT6 801 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 TCF7L2Q9NQB0 619 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 SLC6A13Q9NSD5 602 aa9.61□□□□□ -0.87
BRCA1-213ENST00000476777 A0A0G2JPF8 293 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 A0A1B0GWA3 101 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 HNRNPCL2B2RXH8 293 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 HNRNPCL3B7ZW38 293 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 ITM2AO43736 263 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 HNRNPCL1O60812 293 aaKnown RBP9.6□□□□□ -0.87
BRCA1-213ENST00000476777 SPAG7O75391 227 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 MFN2O95140 757 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 SNAP29O95721 258 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 IGHV1-46P01743 117 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 IGHV3-13P01766 116 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 IGHMP01871 453 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 MT-ND5P03915 603 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 BPGMP07738 259 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 HNRNPCL4P0DMR1 293 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 ETFAP13804 333 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 ZNF12P17014 697 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 HTR2AP28223 471 aa9.6□□□□□ -0.87
BRCA1-213ENST00000476777 PCGF2P35227 344 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms