RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 MKRN2OSH3BPM6 223 aa25.74■■□□□ 1.71
VEGFA-211ENST00000476772 TFECO14948 347 aaPredicted RBP25.74■■□□□ 1.71
VEGFA-211ENST00000476772 ZNF708P17019 499 aa25.74■■□□□ 1.71
VEGFA-211ENST00000476772 ZNF24P17028 368 aa25.74■■□□□ 1.71
VEGFA-211ENST00000476772 PLA2G5P39877 138 aa25.74■■□□□ 1.71
VEGFA-211ENST00000476772 GGTLC2Q14390 218 aa25.74■■□□□ 1.71
VEGFA-211ENST00000476772 LYPD4Q6UWN0 246 aa25.74■■□□□ 1.71
VEGFA-211ENST00000476772 OR5M11Q96RB7 305 aa25.74■■□□□ 1.71
VEGFA-211ENST00000476772 RERGLQ9H628 205 aa25.74■■□□□ 1.71
VEGFA-211ENST00000476772 LDAHQ9H6V9 325 aa25.74■■□□□ 1.71
VEGFA-211ENST00000476772 NDUFA13Q9P0J0 144 aa25.74■■□□□ 1.71
VEGFA-211ENST00000476772 H3BSA7 217 aa25.73■■□□□ 1.71
VEGFA-211ENST00000476772 TRMUO75648 421 aaKnown RBP25.73■■□□□ 1.71
VEGFA-211ENST00000476772 VAMP5O95183 116 aa25.73■■□□□ 1.71
VEGFA-211ENST00000476772 TMPRSS3P57727 454 aa25.73■■□□□ 1.71
VEGFA-211ENST00000476772 SRYQ05066 204 aa25.73■■□□□ 1.71
VEGFA-211ENST00000476772 POU4F2Q12837 409 aa25.73■■□□□ 1.71
VEGFA-211ENST00000476772 PDSS1Q5T2R2 415 aa25.73■■□□□ 1.71
VEGFA-211ENST00000476772 EEF1A1P5Q5VTE0 462 aa25.73■■□□□ 1.71
VEGFA-211ENST00000476772 NANOGP1Q8N7R0 232 aa25.73■■□□□ 1.71
VEGFA-211ENST00000476772 SYT14Q8NB59 555 aa25.73■■□□□ 1.71
VEGFA-211ENST00000476772 ZNF845Q96IR2 970 aaPredicted RBP25.73■■□□□ 1.71
VEGFA-211ENST00000476772 KCNK17Q96T54 332 aa25.73■■□□□ 1.71
VEGFA-211ENST00000476772 MND1Q9BWT6 205 aa25.73■■□□□ 1.71
VEGFA-211ENST00000476772 EXO5Q9H790 373 aa25.73■■□□□ 1.71
VEGFA-211ENST00000476772 CHCHD3Q9NX63 227 aaKnown RBP25.73■■□□□ 1.71
VEGFA-211ENST00000476772 MOKQ9UQ07 419 aa25.73■■□□□ 1.71
VEGFA-211ENST00000476772 LSM2Q9Y333 95 aaKnown RBP25.73■■□□□ 1.71
VEGFA-211ENST00000476772 CEPT1Q9Y6K0 416 aa25.73■■□□□ 1.71
VEGFA-211ENST00000476772 TRGV5A0A0B4J1U4 118 aa25.72■■□□□ 1.71
VEGFA-211ENST00000476772 MYL12BO14950 172 aa25.72■■□□□ 1.71
VEGFA-211ENST00000476772 LIMS3P0CW19 117 aa25.72■■□□□ 1.71
VEGFA-211ENST00000476772 LIMS4P0CW20 117 aa25.72■■□□□ 1.71
VEGFA-211ENST00000476772 TTKP33981 857 aa25.72■■□□□ 1.71
VEGFA-211ENST00000476772 DOC2BQ14184 412 aa25.72■■□□□ 1.71
VEGFA-211ENST00000476772 MED22Q15528 200 aa25.72■■□□□ 1.71
VEGFA-211ENST00000476772 TBR1Q16650 682 aa25.72■■□□□ 1.71
VEGFA-211ENST00000476772 LHFPL3Q86UP9 236 aa25.72■■□□□ 1.71
VEGFA-211ENST00000476772 SMAP2Q8WU79 429 aaPredicted RBP25.72■■□□□ 1.71
VEGFA-211ENST00000476772 CNN2Q99439 309 aaKnown RBP25.72■■□□□ 1.71
VEGFA-211ENST00000476772 JAM3Q9BX67 310 aa25.72■■□□□ 1.71
VEGFA-211ENST00000476772 FKBP7Q9Y680 259 aa25.72■■□□□ 1.71
VEGFA-211ENST00000476772 C12orf71A8MTZ7 269 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 ACTL6AO96019 429 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 POU4F3Q15319 338 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 Q6ZS92 163 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 ZNF367Q7RTV3 350 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 MEIOBQ8N635 442 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 ROBO4Q8WZ75 1007 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 CPNE4Q96A23 557 aaPredicted RBP25.71■■□□□ 1.71
VEGFA-211ENST00000476772 TBX5Q99593 518 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 ZNF649Q9BS31 505 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 TSPAN10Q9H1Z9 355 aaPredicted RBP25.71■■□□□ 1.71
VEGFA-211ENST00000476772 TIGARQ9NQ88 270 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 B9D1Q9UPM9 204 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 ZNF407Q9C0G0 2248 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 SLC35F4A4IF30 521 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 SLC16A7O60669 478 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 NAA10P41227 235 aaPredicted RBP25.71■■□□□ 1.71
VEGFA-211ENST00000476772 SLC17A1Q14916 467 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 ZBTB46Q86UZ6 589 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 ACBD7Q8N6N7 88 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 RBMXL3Q8N7X1 1067 aaKnown RBP25.71■■□□□ 1.71
VEGFA-211ENST00000476772 POMGNT2Q8NAT1 580 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 OR10H4Q8NGA5 316 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 OR9K2Q8NGE7 335 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 EXTL1Q92935 676 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 ERVK13-1Q9NX77 482 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 SPRR3Q9UBC9 169 aa25.71■■□□□ 1.71
VEGFA-211ENST00000476772 SELENOFO60613 162 aa25.7■■□□□ 1.7
VEGFA-211ENST00000476772 TFP02787 698 aa25.7■■□□□ 1.7
VEGFA-211ENST00000476772 CTLA4P16410 223 aa25.7■■□□□ 1.7
VEGFA-211ENST00000476772 UCNP55089 124 aa25.7■■□□□ 1.7
VEGFA-211ENST00000476772 CLDN17P56750 224 aa25.7■■□□□ 1.7
VEGFA-211ENST00000476772 CAMK2DQ13557 499 aa25.7■■□□□ 1.7
VEGFA-211ENST00000476772 BCL2A1Q16548 175 aa25.7■■□□□ 1.7
VEGFA-211ENST00000476772 TIGD6Q17RP2 521 aa25.7■■□□□ 1.7
VEGFA-211ENST00000476772 VASNQ6EMK4 673 aa25.7■■□□□ 1.7
VEGFA-211ENST00000476772 CREB3L2Q70SY1 520 aa25.7■■□□□ 1.7
VEGFA-211ENST00000476772 CLVS1Q8IUQ0 354 aaPredicted RBP25.7■■□□□ 1.7
VEGFA-211ENST00000476772 ZNF511Q8NB15 262 aa25.7■■□□□ 1.7
VEGFA-211ENST00000476772 PCDHGB7Q9Y5F8 929 aa25.7■■□□□ 1.7
VEGFA-211ENST00000476772 CCDC160A6NGH7 325 aa25.69■■□□□ 1.7
VEGFA-211ENST00000476772 NPIPA2E9PIF3 369 aa25.69■■□□□ 1.7
VEGFA-211ENST00000476772 NPIPA3F8WFD2 350 aa25.69■■□□□ 1.7
VEGFA-211ENST00000476772 CD79BP40259 229 aa25.69■■□□□ 1.7
VEGFA-211ENST00000476772 FMODQ06828 376 aa25.69■■□□□ 1.7
VEGFA-211ENST00000476772 OR2G6Q5TZ20 316 aa25.69■■□□□ 1.7
VEGFA-211ENST00000476772 OR6X1Q8NH79 312 aa25.69■■□□□ 1.7
VEGFA-211ENST00000476772 ABHD17AQ96GS6 310 aa25.69■■□□□ 1.7
VEGFA-211ENST00000476772 DMXL2Q8TDJ6 3036 aa25.69■■□□□ 1.7
VEGFA-211ENST00000476772 IGLV1-36A0A0B4J1U3 117 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 TMEM129A0AVI4 362 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 GPANK1O95872 356 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 GTF2A1P52655 376 aaPredicted RBP25.68■■□□□ 1.7
VEGFA-211ENST00000476772 ETFDHQ16134 617 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 C3AR1Q16581 482 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 GPR107Q5VW38 600 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 ABLIM2Q6H8Q1 611 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 HDDC2Q7Z4H3 204 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms