RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 KCNA7Q96RP8 456 aa3.4□□□□□ -1.87
VPS13D-207ENST00000476169 SORT1Q99523 831 aa3.4□□□□□ -1.87
VPS13D-207ENST00000476169 RBM4BQ9BQ04 359 aaKnown RBP3.4□□□□□ -1.87
VPS13D-207ENST00000476169 SYT15Q9BQS2 421 aa3.4□□□□□ -1.87
VPS13D-207ENST00000476169 CHIAQ9BZP6 476 aa3.4□□□□□ -1.87
VPS13D-207ENST00000476169 ZYG11BQ9C0D3 744 aa3.4□□□□□ -1.87
VPS13D-207ENST00000476169 NDE1Q9NXR1 346 aa3.4□□□□□ -1.87
VPS13D-207ENST00000476169 B4GALT7Q9UBV7 327 aa3.4□□□□□ -1.87
VPS13D-207ENST00000476169 RIMS3Q9UJD0 308 aa3.4□□□□□ -1.87
VPS13D-207ENST00000476169 DIP2CQ9Y2E4 1556 aa3.4□□□□□ -1.87
VPS13D-207ENST00000476169 YARS2Q9Y2Z4 477 aaKnown RBP3.4□□□□□ -1.87
VPS13D-207ENST00000476169 ATP6V1DQ9Y5K8 247 aa3.4□□□□□ -1.87
VPS13D-207ENST00000476169 CCDC141Q6ZP82 1450 aa3.4□□□□□ -1.87
VPS13D-207ENST00000476169 CNTNAP1P78357 1384 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 KIF15Q9NS87 1388 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 RTEL1-TNFRSF6BF6WH68 1400 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 DAPK1P53355 1430 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 MIA2Q96PC5 1412 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 A0A1B0GTH9 108 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 A0A1B0GW15 77 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 FOXI3A8MTJ6 420 aaPredicted RBP3.39□□□□□ -1.87
VPS13D-207ENST00000476169 DCTN6O00399 190 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 ZBTB5O15062 677 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 NIPSNAP2O75323 286 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 CDK14O94921 469 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 SERPINA5P05154 406 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 KLK3P07288 261 aaPredicted RBP3.39□□□□□ -1.87
VPS13D-207ENST00000476169 PSMC3P17980 439 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 ADORA2BP29275 332 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 GCKP35557 465 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 DDOSTP39656 456 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 RGRP47804 291 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 RPL29P47914 159 aaKnown RBP3.39□□□□□ -1.87
VPS13D-207ENST00000476169 SLC26A2P50443 739 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 GPX6P59796 221 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 ACTA2P62736 377 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 GNB1P62873 340 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 ACTG2P63267 376 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 ACTC1P68032 377 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 ACTA1P68133 377 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 PAX2Q02962 417 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 ECH1Q13011 328 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 STX3Q13277 289 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 TRAM2Q15035 370 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 ARL6IP1Q15041 203 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 NCF4Q15080 339 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 SIX1Q15475 284 aaPredicted RBP3.39□□□□□ -1.87
VPS13D-207ENST00000476169 PSMD5Q16401 504 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 MICAQ29983 383 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 C18orf21Q32NC0 220 aaPredicted RBP3.39□□□□□ -1.87
VPS13D-207ENST00000476169 MOGAT2Q3SYC2 334 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 TRIM40Q6P9F5 258 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 RFWD3Q6PCD5 774 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 LRRTM1Q86UE6 522 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 SLC26A11Q86WA9 606 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 ZFAND4Q86XD8 727 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 PRR22Q8IZ63 422 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 PDIK1LQ8N165 341 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 FTMTQ8N4E7 242 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 OR56A4Q8NGH8 313 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 ANP32BQ92688 251 aaKnown RBP3.39□□□□□ -1.87
VPS13D-207ENST00000476169 NEIL2Q969S2 332 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 MRGPRFQ96AM1 343 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 NAF1Q96HR8 494 aaKnown RBP3.39□□□□□ -1.87
VPS13D-207ENST00000476169 PGLYRP2Q96PD5 576 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 TSSK3Q96PN8 268 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 MCHR1Q99705 422 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 CHID1Q9BWS9 393 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 NEUROG2Q9H2A3 272 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 TUBB1Q9H4B7 451 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 EML4Q9HC35 981 aaKnown RBP3.39□□□□□ -1.87
VPS13D-207ENST00000476169 ANKHQ9HCJ1 492 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 VCX3AQ9NNX9 186 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 AMBNQ9NP70 447 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 GIN1Q9NXP7 522 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 KCNIP1Q9NZI2 227 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 CCDC59Q9P031 241 aaKnown RBP3.39□□□□□ -1.87
VPS13D-207ENST00000476169 RSPH14Q9UHP6 348 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 ENPP5Q9UJA9 477 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 TNFRSF18Q9Y5U5 241 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 TCOF1Q13428 1488 aaKnown RBP3.39□□□□□ -1.87
VPS13D-207ENST00000476169 AGLP35573 1532 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 MAP3K1Q13233 1512 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 SIGLEC1Q9BZZ2 1709 aa3.39□□□□□ -1.87
VPS13D-207ENST00000476169 IGHV4-30-2A0A087WSY4 118 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 A0A1B0GW55 424 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 MEIOCA2RUB1 952 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 FAM231BA6NCW3 169 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 EFCAB7A8K855 629 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 LOC110117498-PIK3R3F6TDL0 507 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 NTN3O00634 580 aaPredicted RBP3.38□□□□□ -1.87
VPS13D-207ENST00000476169 NDUFS6O75380 124 aaKnown RBP3.38□□□□□ -1.87
VPS13D-207ENST00000476169 DUS4LO95620 317 aaKnown RBP3.38□□□□□ -1.87
VPS13D-207ENST00000476169 CD160O95971 181 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 LALBAP00709 142 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 DUX4L2P0CJ85 424 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 DUX4L3P0CJ86 424 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 DUX4L4P0CJ87 422 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 DUX4L5P0CJ88 424 aa3.38□□□□□ -1.87
VPS13D-207ENST00000476169 DUX4L6P0CJ89 424 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms