RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 MAVSQ7Z434 540 aa9.29□□□□□ -0.92
CDRT1-205ENST00000475944 COMTD1Q86VU5 262 aa9.29□□□□□ -0.92
CDRT1-205ENST00000475944 LRP11Q86VZ4 500 aa9.29□□□□□ -0.92
CDRT1-205ENST00000475944 OR5J2Q8NH18 312 aa9.29□□□□□ -0.92
CDRT1-205ENST00000475944 YIPF5Q969M3 257 aa9.29□□□□□ -0.92
CDRT1-205ENST00000475944 MOGAT1Q96PD6 335 aa9.29□□□□□ -0.92
CDRT1-205ENST00000475944 TMEM43Q9BTV4 400 aa9.29□□□□□ -0.92
CDRT1-205ENST00000475944 RSPO3Q9BXY4 272 aaPredicted RBP9.29□□□□□ -0.92
CDRT1-205ENST00000475944 PARD6BQ9BYG5 372 aa9.29□□□□□ -0.92
CDRT1-205ENST00000475944 NKIRAS1Q9NYS0 192 aa9.29□□□□□ -0.92
CDRT1-205ENST00000475944 TREM2Q9NZC2 230 aa9.29□□□□□ -0.92
CDRT1-205ENST00000475944 MYEF2Q9P2K5 600 aaKnown RBP9.29□□□□□ -0.92
CDRT1-205ENST00000475944 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.29□□□□□ -0.92
CDRT1-205ENST00000475944 FZR1Q9UM11 496 aa9.29□□□□□ -0.92
CDRT1-205ENST00000475944 V9GYY5 206 aaPredicted RBP9.29□□□□□ -0.92
CDRT1-205ENST00000475944 LRRN3E7EW58 273 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 C11orf98E9PRG8 122 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 WNT9BO14905 357 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 SPRY1O43609 319 aaPredicted RBP9.28□□□□□ -0.92
CDRT1-205ENST00000475944 TPST1O60507 370 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 SERPINB7O75635 380 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 RP2O75695 350 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 NCR1O76036 304 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 OR6A2O95222 327 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 PNPP00491 289 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 ADORA3P0DMS8 318 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 OR8G3PP0DMU2 310 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 NAT2P11245 290 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 SLC6A2P23975 617 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 MRPL19P49406 292 aaKnown RBP9.28□□□□□ -0.92
CDRT1-205ENST00000475944 COMPP49747 757 aaPredicted RBP9.28□□□□□ -0.92
CDRT1-205ENST00000475944 SLC18A1P54219 525 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 CDH12P55289 794 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 BIDP55957 195 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 MYBPC1Q00872 1141 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 SCARB2Q14108 478 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 FAHD2BQ6P2I3 314 aaPredicted RBP9.28□□□□□ -0.92
CDRT1-205ENST00000475944 NHLRC1Q6VVB1 395 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 USP43Q70EL4 1123 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 DPPA2Q7Z7J5 298 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 ARMC8Q8IUR7 673 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 ZNF584Q8IVC4 421 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 SLC22A24Q8N4F4 322 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 OR6X1Q8NH79 312 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 SNX33Q8WV41 574 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 ZBTB9Q96C00 473 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 FAHD2AQ96GK7 314 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 JMJD8Q96S16 334 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 C1orf198Q9H425 327 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 TMEM38AQ9H6F2 299 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 SLC25A37Q9NYZ2 338 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 TAAR3PQ9P1P4 343 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 PCDHB10Q9UN67 800 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 CORO2BQ9UQ03 480 aa9.28□□□□□ -0.92
CDRT1-205ENST00000475944 C17orf100A8MU93 164 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 TRIM77I1YAP6 450 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 POLR3GO15318 223 aaPredicted RBP9.27□□□□□ -0.93
CDRT1-205ENST00000475944 CHP2O43745 196 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 FARS2O95363 451 aaKnown RBP9.27□□□□□ -0.93
CDRT1-205ENST00000475944 PTHP01270 115 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 EPHA1P21709 976 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 MAGEB1P43366 347 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 KLF3P57682 345 aaPredicted RBP9.27□□□□□ -0.93
CDRT1-205ENST00000475944 HILS1P60008 231 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 LMO4P61968 165 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 TEKQ02763 1124 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 RBBP4Q09028 425 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 PCGF3Q3KNV8 242 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 ALKBH6Q3KRA9 238 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 ACSM5Q6NUN0 579 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 TMEM53Q6P2H8 277 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 TMEM154Q6P9G4 183 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 ZNF613Q6PF04 617 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 THSD4Q6ZMP0 1018 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 SLC35D2Q76EJ3 337 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 WDFY1Q8IWB7 410 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 SKA3Q8IX90 412 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 MSRB3Q8IXL7 192 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 C3orf56Q8N813 242 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 HIPK4Q8NE63 616 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 SLC30A7Q8NEW0 376 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 FAM216AQ8WUB2 273 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 GCDHQ92947 438 aaPredicted RBP9.27□□□□□ -0.93
CDRT1-205ENST00000475944 TMEM54Q969K7 222 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 ZNF566Q969W8 418 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 RAB39BQ96DA2 213 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 SPDL1Q96EA4 605 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 RBM4Q9BWF3 364 aaKnown RBP9.27□□□□□ -0.93
CDRT1-205ENST00000475944 ZNF665Q9H7R5 613 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 RNF121Q9H920 327 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 CDH20Q9HBT6 801 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 SLC52A3Q9NQ40 469 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 HINT3Q9NQE9 182 aaKnown RBP9.27□□□□□ -0.93
CDRT1-205ENST00000475944 TMEM38BQ9NVV0 291 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 SLCO1C1Q9NYB5 712 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 GLTPQ9NZD2 209 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 VAPAQ9P0L0 249 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 ANGPT4Q9Y264 503 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 GMEB1Q9Y692 573 aa9.27□□□□□ -0.93
CDRT1-205ENST00000475944 USH1CQ9Y6N9 552 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms